Gene Sros_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1227 
Symbol 
ID8664502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1256745 
End bp1258412 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336968 
Protein GI271962772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.584502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.010904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCGGGAACGC ACAGGACCCG GCGAGCACCT CGTCCGACTC GCCGCCCGCA 
TCCCCCCTCA GCGAGGAGCG CGTGCTCCGC CGCGGTGACG AGGGCCGCAT GCTCACCGGC
GTCTGCGCGG GCCTGGGCCG CTACGCCGGG ATCGACCCGG TGCTGTTCCG CGTCGGCTTC
GCGGTGCTGG TCCTCGGCTC GGGGATCGGC GTCATGCTCT ACATCGCGGC GTTCCTGCTG
ATGCGGGAGG CGAACGGCGG CCCGGGATAC ATGGAGCAGT GGACCCGGCG CACCTTCGAC
AGCGAGACCG TGCTGGCCCT GCTGACCGGC GTGTTCGCCT TCGGGCTGAT CATCAACCTG
TCCTCGGACG GCATCGGCAC CGGCACGGTC GTGGTCGGCA CGCTGTTCGC CATCGTCCTG
CTCGCCGCCC ACGCCCGCGG CGTCGACCTG CTGGCCGTGG CCCGTTCGCT GCCCGAGCGG
ATCCGCGGCC GCCGCGTTCC CCGCCCGGCC GATCCGCCGC CCGCGGCCTT CGCCCCCGCC
CCGCCCGTCG CGCACTCCTA TCCGGCCGCG CATCCGCAGA CCGGATCGAT GTCCACCGCC
CCCTACGCGG CCCAGCCCCC GGCCGCCGGT CCGGCGCCGG GCCCCGTCCC GCAGGGCGCG
GATCCGGCGC CGGCCGCCGG CATCCCGTCC GCCGGGAGCG CGCCGCTCCC CGCGGACACG
CCCCGGGCCG AGGACACGCC GTCACCGGAG CACGCGCCGC CGTACGCGGA CACGCCGCTC
CCTGCCGGCA CGCCGTCAGC AGGCACGGCG TTCCCCGCCG GCACGCCGTC ACCGGAGCAC
GCGCCGCCTT ACGCGGGCAC GGCGCCGGGC GCGTTCCCGG CCGGGGGCAT GCCGCCGCCC
CATCCCGCCG CCAGGCCGTC GTTCGACTCC TCCGGCGAGC CGTTCTCGCC CTACGGGCCC
TACCGGCCCC TGGACCCCCG CAAGCGGCAG CAGCAGTACT CCCCCTATGA CCTCTCCGAG
TACGGCGGGC CGGTCCGGAC CGCGCCCCGG CCGAGGCGGC GCCGGTCGTT CGTCGGAGGC
GTCACCCTAT GCCTGGCCAT GATCGTTGGA GGGATCATCG TGGCGATCCA AGCCACGTCG
GGATCGGTCA ACATGACGAT CGCCGGCGGC GCGATGCTGA TCACCATCGG CGCCGGCCTC
CTGGTCGCCG CCTGGTTCGG CCGGGGCGCG GCCCTGGTCG CGGCGGGCAC GATCATCTCG
ATCGCCCTGG TCGCGGGGTC CATGCTGACC GGCATGCCGA AGAGGTTCGG CAGCTACCAC
TGGGAGCCGA CCAAGATGTC GGAGATCGCG AAGGACTACG ACGTGGGCGT CGGCGAGGGC
ACCCTCGACC TCAGCGACCT GACGTTCCCG CCGGGCTCGC GGACCGTCTT CGACGCCTCC
GTCTCGGTGG GCCAGATCAG CGTGATCCTG CCGCCGACGG TCCGGGTCGA GGTCAACGGA
CACACCAAAC TGGGCGACGT CAAGATCGAC CATGCGGTGG AGGGCGGGGC CGACATCCAG
CACAGCAGGG TCCTGGAGCC AGAGATCGCC CCGAAGGGCG ACGTGGCGAC CGTCGTCCTG
AACGTCAAGG CAGGAATCGG AGACGTGGAG GTGCGCCGTG CGGCCTGA
 
Protein sequence
MTDTGNAQDP ASTSSDSPPA SPLSEERVLR RGDEGRMLTG VCAGLGRYAG IDPVLFRVGF 
AVLVLGSGIG VMLYIAAFLL MREANGGPGY MEQWTRRTFD SETVLALLTG VFAFGLIINL
SSDGIGTGTV VVGTLFAIVL LAAHARGVDL LAVARSLPER IRGRRVPRPA DPPPAAFAPA
PPVAHSYPAA HPQTGSMSTA PYAAQPPAAG PAPGPVPQGA DPAPAAGIPS AGSAPLPADT
PRAEDTPSPE HAPPYADTPL PAGTPSAGTA FPAGTPSPEH APPYAGTAPG AFPAGGMPPP
HPAARPSFDS SGEPFSPYGP YRPLDPRKRQ QQYSPYDLSE YGGPVRTAPR PRRRRSFVGG
VTLCLAMIVG GIIVAIQATS GSVNMTIAGG AMLITIGAGL LVAAWFGRGA ALVAAGTIIS
IALVAGSMLT GMPKRFGSYH WEPTKMSEIA KDYDVGVGEG TLDLSDLTFP PGSRTVFDAS
VSVGQISVIL PPTVRVEVNG HTKLGDVKID HAVEGGADIQ HSRVLEPEIA PKGDVATVVL
NVKAGIGDVE VRRAA