Gene Sros_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1052 
Symbol 
ID8664326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1069068 
End bp1069943 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336795 
Protein GI271962599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.236232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00758039 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCC CGACGCCTGA CAGCTGGCCG CCGCGGCCTC CCTCCCAGGG GGGGAGGCCG 
CAAGGGCATC CCCGCGGGCC GGTGCCGCCG TACGGGCAGC CGCCCTACCA GCAGCAGCAC
CCTGGATACC AGCAGTACGG CCAGCCATAT GAGGAGTGGC CCGAGGGCCG GGTCGACGGC
GGCCGGGTGA TGCGGTCGGT GCTCATCCTG GCGGGGGTCG CCGGGGTGAT CACGGTGCTG
GTCGGCATGC TCTACATGGT GGCGGCGCCC GAGCAGTACG GCCTGGCCGA CCAGCGCACC
ACGCTGCCGC CCCGCAGCCA GACGAACGCC ACCGGACCGG CGGACCCCTA CTTCCAGGCC
GAGCCGACCG TGCCGCCGCC CCAGCCGAGC ATCCCGCCGG CCCCCGCCAT GCAGCCCTCG
ACCCCGGTAC GCGTGGTCAT CCCACGCCTC GGCGTCAACG CACCGATCAG GTCGGTGGGG
CTCGACAAGC AGGGCGCGAT CGAGGTGCCG CCGGTCACCA ACCCGAACCT GGTCGGCTGG
TACCGTTCGG GGCCCACGGC CGGGGAGGCC GGTCCGGCGA TCATGCTGGG GCACAAGGAC
ACGAAGTCGG GGAGCGCGGT CTTCAGCCGC CTCGACGAGA TCCGCAACGG CGACGTCATC
GAGGTGCACC GTAAGGACGG CATCGTCGCC GTGTTCACCG TGGGAGGCCT CGAACAGGCG
GAGAAGGCGG TCTTCCCGAC GCAGCGGGTG TACGGCGAGT CGCCCAATCC CCAGCTCCAC
CTGATCACGT GCGGCGGCAC CTACGACCGC GCGACCGGCC ACTACACCGA CAATGTCATC
GCCTACGCGA CGATGACGAG CACGCGCAAG GCATGA
 
Protein sequence
MTTPTPDSWP PRPPSQGGRP QGHPRGPVPP YGQPPYQQQH PGYQQYGQPY EEWPEGRVDG 
GRVMRSVLIL AGVAGVITVL VGMLYMVAAP EQYGLADQRT TLPPRSQTNA TGPADPYFQA
EPTVPPPQPS IPPAPAMQPS TPVRVVIPRL GVNAPIRSVG LDKQGAIEVP PVTNPNLVGW
YRSGPTAGEA GPAIMLGHKD TKSGSAVFSR LDEIRNGDVI EVHRKDGIVA VFTVGGLEQA
EKAVFPTQRV YGESPNPQLH LITCGGTYDR ATGHYTDNVI AYATMTSTRK A