Gene Sros_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1049 
Symbol 
ID8664323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1065734 
End bp1067020 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336792 
Protein GI271962596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0105777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCT TTCTACGTGG ACCCGGCGCA CACGTGAACC GCCTGGCCAC GACTCTCTAC 
GGCTACACGT TCCTGAACGA CTTCATCCTG CTCTACCCGG TCTACGCACT GCTGTTCGTC
GACACGGGCC TGTCGACCGC CGAGATCTCC TCGCTGTTCG TGATCTGGTC GGTCACCTCC
CTGGTGCTGG AGGTGCCCTC CGGCGTATGG GCCGACGCCG TCTCGCGGCG GCTGCTCCTC
ACCCTGGCGC CGCTGCTGGC CGCCGCCGGC TACGCCCTGT GGATCATCGC TCCCTCCTAC
TGGGCGTTCG CCGCCGGCTT CGTGCTCTGG GGCGCGGCGG GAGCGCTGCA GTCGGGCGCC
ATGGAAGCGC TCGTCTACAC CGAGCTCGAC CGCCTGGGCG CCGCCGGCCG CTACGCCACG
ATCATGGGTC GTGGCCGCGC GCTCGGCACC GGCGCCACCA TGGTGGCCAC GGCCGCCGCC
GCCCCCGCGC TGGCCGTGGG CGGCTACCCG ATGCTCGGGG CGGCCAGCGT CCTGGCATGC
CTGCTCTGCG CGGCCGTCGC GACGACCTTC CCCGAGCACC GGGTGGAGAG CACGGAGAGC
CCGGAGGAGA CGCCGCCGGG CGGCTACGCC GCCATCCTGC GGGAAGGCGT GCGGGAGATG
CGCTCCAGCC GATCGGTACG GCGGGCGGTA CTGCTGCTGG CCGTGGTGTG GGCGGTCTGG
GGCTCGCTTG AGGAGTACGT CGCCCTGCTC GCGGCCGCCA CCGGCGTCGT CGCGTACGCC
GTACCGCTCC TGGTGCTTCT CGTCTCGGCG GGGGTCGCGC TCGGCGGCGT GCTCGCGACG
ACCGGGCGGC GTCTCACGGA CCGGGCGTTC GCCGGAATCC TCGCCGCCGG GGCGCTGGCG
CTCGGCGCGG GAGCGATCAG TGGGGTCCCG GCGGGATTCG CCGCGATCGC GGTGGCCTTC
TGCCTATTCG AGATGGCGAC AGTGCTGGCC GGCGCGCGGC TCCAGGACCG CATCACCGGT
CCGGCCCGTG CCACGGTGAC CTCGCTGGCC GGACTGGGCA CGGATGTGGC GGGCATCCTC
GTCTACGGCG GCTACGCCGC GGCTTCCACG GTGGCCGGGC ACGACGTGAT CTTCGCCGTT
TTCGCCGTGC CGTACCTCGT CCTCGCGCTG GCCCTGACCC GCGGCGGCGG GCCGCGCTCC
GGCGGTGAGC GGCGCCGGGA GCGACGGGCG TCCGGCGGGA GGGGCGCATC CCCCGACCCG
GCACCTCCCG TCGGACGATT TTCATGA
 
Protein sequence
MISFLRGPGA HVNRLATTLY GYTFLNDFIL LYPVYALLFV DTGLSTAEIS SLFVIWSVTS 
LVLEVPSGVW ADAVSRRLLL TLAPLLAAAG YALWIIAPSY WAFAAGFVLW GAAGALQSGA
MEALVYTELD RLGAAGRYAT IMGRGRALGT GATMVATAAA APALAVGGYP MLGAASVLAC
LLCAAVATTF PEHRVESTES PEETPPGGYA AILREGVREM RSSRSVRRAV LLLAVVWAVW
GSLEEYVALL AAATGVVAYA VPLLVLLVSA GVALGGVLAT TGRRLTDRAF AGILAAGALA
LGAGAISGVP AGFAAIAVAF CLFEMATVLA GARLQDRITG PARATVTSLA GLGTDVAGIL
VYGGYAAAST VAGHDVIFAV FAVPYLVLAL ALTRGGGPRS GGERRRERRA SGGRGASPDP
APPVGRFS