Gene Sros_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1029 
Symbol 
ID8664303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand- 
Start bp1044561 
End bp1045238 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336772 
Protein GI271962576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.617928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.14633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCA TCGGAGCGGG GTTCGGCCGT ACGGGGACCG CCTCGTTGAA GGCGGCGCTG 
GAGCATCTGG GCCTGCGGCC CTGCTATCAC ATGCTTGAGA TCTTCGATCA TCCCGAGATG 
GCCGGGCAGT GGCTGGACAT CGCGGAGGGA CGGTCGGCGG ACTGGGACGC GGTGTTCGAC 
GGCTACCAGG CCACGGTCGA CTGGCCGGGC GCGTCCTACT GGCGCGAGCT CGCCGACCAC 
TACCCCGAGG CCAAGATCCT GCTGAACGTC CGGGACCCCC AGCGGTGGTA CAGGAGCATG 
GAGGCCACGA TCTTCAAGCA GGCACGCAAA AGGGAGTCCC TGGCCGGACG CGCGGGATAC 
GCCGTACTGT GCCGGATGAG CGGTGATTTC GCCGCGTTCA CCAGGATGAC CCGCGAGGTG 
GTCGTCGAGC GGGTCTTCGG CGGCGACATC ACCGACAAGG CACACGTCCT GAAGGTCTTC 
AAGGACCACA CCGACGCGGT GCGCGCGTCG TTCCCGCCGG ACCGGGTGCT GGTCTACGAC 
GTCACGCAGG GCTGGGAGCC GCTCTGCGCC TTTCTCGGTC TCCCCGTCCC CGCGGCGCCG 
TTCCCCCGGC TCAACGACAG TGAGAGCTTC GTCCGCGACG CTCGCAGGCG GATCGCCCGG 
ATGGTCCTGC GCCGCTGA
 
Protein sequence
MQVIGAGFGR TGTASLKAAL EHLGLRPCYH MLEIFDHPEM AGQWLDIAEG RSADWDAVFD 
GYQATVDWPG ASYWRELADH YPEAKILLNV RDPQRWYRSM EATIFKQARK RESLAGRAGY 
AVLCRMSGDF AAFTRMTREV VVERVFGGDI TDKAHVLKVF KDHTDAVRAS FPPDRVLVYD 
VTQGWEPLCA FLGLPVPAAP FPRLNDSESF VRDARRRIAR MVLRR