Gene Sros_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1004 
Symbol 
ID8664278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1019919 
End bp1021028 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content70% 
IMG OID 
ProductPhosphoserine aminotransferase-like protein 
Protein accessionYP_003336748 
Protein GI271962552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACA TCGTGATTCC CTCTGACATC AAGCCCGCCG ACGGCCGTTT CGGCTGCGGG 
CCCTCGAAGG TGCGCCCCGA GCAGCTCTCG GCTCTCGCCG CCTCAGGATC CAGCGTGCTG
GGCACCTCCC ACCGCCAGAA GCCGGTCAAG GCTCTCGTCG GGCGCGTCCG CGCGGGCCTG
TCGGAGCTGT TCTCGCTCCC CGAGGGGTAC GAGGTCGTCC TCGGCAACGG CGGCACCACC
GCGTTCTGGG ACATCGCCGC CTTCGGGCTC GTCCGTGAGA AGTCGCAGCA CCTGCACTTC
GGCGAGTTCT CCTCGAAGTT CGCCTCCGTC GTGGCGAAGG CCCCGTGGCT GGGCGAGCCG
ACCGTGATCA AGTCCGAGGT CGGCAGCCAC CCCGAGGCCC GCACGGAGGA GGGCGTGGAC
GTCTACGCGC TCACCCACAA CGAGACCTCG ACCGGCGTCG CGATGCCGAT CAGGCGCGTG
GGCGAGGACG GCTCGCTCGT CCTGGTCGAC GCCACCTCCG GCGCCGGCGG CCTGCCCGTC
GACATCAGCG AGACCGACGT CTACTACTTC GCCCCGCAGA AGAGCTTCGC CTCCGACGGC
GGCCTGTGGA TCGCCCTGAT GTCCCCGGCC GCGCTCGCCC GGGTCGAGGA GATCGCCTCC
AGCGGCCGCT ACATCCCCGA GTTCTTCAGC CTGCCGGTGG CGGTCGACAA CTCCTCCAAG
GACCAGACCT ACAACACCCC GTCGGTCTCC ACGCTGTTCC TGCTCGCCGA CCAGATCGAG
TGGATGAACG GCAACGGCGG CCTGGCCTGG ACCACCGCCC GCACCGCCGA GTCGGCCCGC
CGGCTCTACA CCTGGGCGGA GAAGACCTCC TACACCGCGC CGTTCGCCGC TCCGGAGTTC
CGCTCCAACG TGGTCGGCAC CATCGACTTC GCCGACGGCG TCGACGCCGC GGAGGTCGCC
AAGGTCCTGC GCGCCAACGG CATCGTGGAC ACCGAGCCCT ACCGCAAGCT CGGCCGCAAC
CAGCTCCGCG TCGCGATGTT CCCGGCCATC GACCCCGACG ACATCGAGGC CCTGACCAAC
TGCATCGACC ACGTCGTCGA GCGGCTCTAG
 
Protein sequence
MADIVIPSDI KPADGRFGCG PSKVRPEQLS ALAASGSSVL GTSHRQKPVK ALVGRVRAGL 
SELFSLPEGY EVVLGNGGTT AFWDIAAFGL VREKSQHLHF GEFSSKFASV VAKAPWLGEP
TVIKSEVGSH PEARTEEGVD VYALTHNETS TGVAMPIRRV GEDGSLVLVD ATSGAGGLPV
DISETDVYYF APQKSFASDG GLWIALMSPA ALARVEEIAS SGRYIPEFFS LPVAVDNSSK
DQTYNTPSVS TLFLLADQIE WMNGNGGLAW TTARTAESAR RLYTWAEKTS YTAPFAAPEF
RSNVVGTIDF ADGVDAAEVA KVLRANGIVD TEPYRKLGRN QLRVAMFPAI DPDDIEALTN
CIDHVVERL