Gene Sros_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0899 
Symbol 
ID8664172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp916299 
End bp917075 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003336647 
Protein GI271962451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA CGACCTGTGA CGAAGTGCGG ATGTCGCTCG GAGCGTACGT GCTCGGGGCC 
CTGGAGCCCG AGGAGTGCGT GTTCGTCGAA GCGCATCTCG CCGAGTGCGC CGGCTGCCGG
GCGGAGTTCG AGGAGCTGAC CGGGGTGGCC ACGTTTCTCG GACGGGTGTC CGAGGAGGAC
GTGGCCCAGG TGGGCAGCCC GCCCCAGGCG GTGCTGGACC GGCTGCTCAG CGCCAGGGTC
AAACGGCGCC GGATGACCCG GGTGCTGCTC TCACTGGCCG CCTCGGTCCT GCTGGTCGGG
CTCGGCGGGA CCCTGTGGTC GGCCACCCAG TCCACCCGGT CCGCCCAGGA CGCCGCGCCG
GTGTCCGCGC CCCGGCCCAG TCTCGCCGAG ACGGTCACCC CCTACTCCGC GAAGGAGAGG
GCCGCCCCCT CGGCGCAGCC CGACGGCGAC GCGCGGCTCA TGCTGGAGGA CGCCGCCGAG
CGGACGGCCA AGGGGAGCGA AGGCTCCGTC CGCGCCACGG TGACCGCGTC GGCGGGGGAG
AAGGCGACCA CGCTCAGGGT CATGCTCACC GGGGTCGCCA AGGGCACCCG GTGCCGGCTG
GACGTGGTCG GCGTCGACGG GGTCCGGGAG ACGGCCGGGA ACTGGATCGT CGACAGGGCC
GCCTACGACA GCTCCGGGGC CTTCACCGGC ACCACCACGA TCCCTCCCTC GGGCATCTCG
AAGTTCGAGA TCGTCACGGC AGGGGGGCGG ATGCTGGTCA CCGCGACCTT CCACTGA
 
Protein sequence
MMMTTCDEVR MSLGAYVLGA LEPEECVFVE AHLAECAGCR AEFEELTGVA TFLGRVSEED 
VAQVGSPPQA VLDRLLSARV KRRRMTRVLL SLAASVLLVG LGGTLWSATQ STRSAQDAAP
VSAPRPSLAE TVTPYSAKER AAPSAQPDGD ARLMLEDAAE RTAKGSEGSV RATVTASAGE
KATTLRVMLT GVAKGTRCRL DVVGVDGVRE TAGNWIVDRA AYDSSGAFTG TTTIPPSGIS
KFEIVTAGGR MLVTATFH