| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0828 |
|---|
| Symbol | |
|---|
| ID | 8664100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 849257 |
|---|
| End bp | 849913 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | membrane protein, DedA family |
|---|
| Protein accession | YP_003336585 |
|---|
| Protein GI | 271962389 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGAC GGATCAACGG GGGCGGCGCG GTGGACTTGA TCACGGAAGT TGTCCGGGCG
ATCAGCGATT TACCCTTCCC CGTGGTGGGG GCGGTGGCCG CGCTCATGGC GTTCGCCGAG
TCCGGCCTGG GCGTCGGGTC GATCTTTCCC GGGGAAATGG GCGTGCTGCT GCTGGGAGCC
GCCGCCGGCA CGCCCGTGCG GTTCGCCGTC ATGCTCCTGC TCGTTGCCTT CGGTGTGACA
GCAGGTGATC ACGTCGGCTA CCTGTTGGGC CGTCGCTACG GAGGGCGGAT GCGGGAGCTG
GCGGTGGTGC GGCGGCTCGG CGTGCGGCAC TGGGACCGCG CCACAGCGGC ACTGCGCCGG
TACGGCGCGG CGGCTGTGTT CGTCACCCGG CTGATCCCCA TCGTGCGCAC ACTCACGCCG
GCCGCGGCCG GCGCCGCCCA GGTGCGGTAC GGGCGCTTCC TGCCCGCCTC GCTGGCGGGA
TCGCTGCTGT GGTCGGCGTT ATACGTAAGC CTGGGCGCGT TCGCGGGCGC CTCCGCCGCC
CACCTGGAGC AGCTGCTGGG ACGCGCGTCT TGGATCCTGC TCGGTGCCCT GGCGGTGCTC
GTCGTGGTGG TGAGCCTGAT ACGGCGCAGG CGCGCGAAGG TGAAGACATC GCGGTAA
|
|---|
| Protein sequence | MFRRINGGGA VDLITEVVRA ISDLPFPVVG AVAALMAFAE SGLGVGSIFP GEMGVLLLGA
AAGTPVRFAV MLLLVAFGVT AGDHVGYLLG RRYGGRMREL AVVRRLGVRH WDRATAALRR
YGAAAVFVTR LIPIVRTLTP AAAGAAQVRY GRFLPASLAG SLLWSALYVS LGAFAGASAA
HLEQLLGRAS WILLGALAVL VVVVSLIRRR RAKVKTSR
|
|---|
| |