Gene Sros_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0825 
Symbol 
ID8664097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp846489 
End bp847274 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type multidrug transport system permease component-like protein 
Protein accessionYP_003336582 
Protein GI271962386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.951149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCC TGCGCACCGC CGCACCCCCC GTCACCGCCG AGCGAGGTTC CGCGACGTGG 
CGGCTCATCA AGGCCGAGAG CACGTTGTGC GTCCGGGACA AGGTCGGCCC CCTGTGGGGT
ATCGGCTTCC CGCTGATCCT GTTGATCGTC CTCGGTAGCG TCCCCGACCT GCGGGAACCC
GTGGAGCCCG GCGGCGGCCT GACGTACTTC GACCTGTATG TGCCTGTCCT GATCCTGTTC
AATCTGGCCA TCCTGGCCAC GGCCTCCCTA CCGACCACGC TCGCCGGATA CCGGGAGAAC
GGCGTGCTGC GGCGCATGCG GACCACGCCG GTCGGCCCGG CCCGCGTGCT CACCGCCCAG
CTCGTGGCCA ACTTCGCCAT CGCGGTCGTC GCGATGGTCC TGTTCCTCGC GGTGGCCGGG
CTCGGCTTCG GCGTCGACCT GCCGAAGCAC GTTCCCGGTT TCGCCTTCGC CTGGCTGCTC
GCGGCGGCCG CGCTGCTCGC GATCGGCCTG CTGATCACCG CGCTCGCGCC CGGGCGTGGC
CCGGCCACGG CGATCGGCAC GGTGCTGTTC TTCCCGATGA TGTTCTTCGC CGGACTCTGG
GTGCCGATCT CGCAGATGCC GCCGCTGCTG AGGAACATCG CCCACTACAC CCCGCTCGGC
GCGGGCATGG GGGCGTTCCA GGACGCGTAC CTGGGTCACT TTCCGTCCGC CGTGCCGCTG
TTGACCCTGG GGGCCTATGC GGTGGTGTGC GCGTTCGTCG CGGTCCGCTG GTTCCGCTGG
GAATAG
 
Protein sequence
MSALRTAAPP VTAERGSATW RLIKAESTLC VRDKVGPLWG IGFPLILLIV LGSVPDLREP 
VEPGGGLTYF DLYVPVLILF NLAILATASL PTTLAGYREN GVLRRMRTTP VGPARVLTAQ
LVANFAIAVV AMVLFLAVAG LGFGVDLPKH VPGFAFAWLL AAAALLAIGL LITALAPGRG
PATAIGTVLF FPMMFFAGLW VPISQMPPLL RNIAHYTPLG AGMGAFQDAY LGHFPSAVPL
LTLGAYAVVC AFVAVRWFRW E