| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0796 |
|---|
| Symbol | |
|---|
| ID | 8664068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 811479 |
|---|
| End bp | 813044 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | amino acid permease family protein |
|---|
| Protein accession | YP_003336553 |
|---|
| Protein GI | 271962357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CAGTGCCACC CGCGGACGCG GACGCGGATG CCAGGAGGCT CGCCGAGCTC
GGCTACAAAC AGGAGCTCTC CCGCACCTGG AGCGGCTTCT CCAACTTCGC CATCTCCTTC
TCGATCATCT CCATCCTGGC CGGGTGTTTC ACCACCTTCG GCCAGGCCTG GAACAACGGC
GGGCCGATCG CCATCTCGTG GGGCTGGCCA CTGATCTCGA TCTTCATTCT GATCATCGGC
CTGTGCATGT CGGAGCTGGT ATCGGCCTAT CCGACCGCCG GCGGCATCTA CTGGTGGGCC
GCCAAGATGG GCAGGCCGGT CCACGGCTGG TTCACCGGGT GGTTCAACCT CGTCGGGCTG
GTCGCGGTGA CCGCCTCGGT GGACTACGGC TGCGCGACGT TCATGAACAT CACGATCAAC
CGGTTCGCCG AGGGCTTCGA GATCTCCCTG GGCAACACCT TCATCCTCTT CACGGTCATC
CTGGTGCTGC ACGCGCTGAT CAACATCTTC AGCCACCGGC TGATCTCCCT GCTGCAGAAC
GTCTCGGTGT GGTGGCACGT GTTCGGGGCG GCCGTGGTGG TGGCGATCCT GATCTTCGGA
CCGGACAGCC ACCAGTCGAT GTCGTTCGTG TTCACCGAGC GCTTCAACAA CTCCGGCTTC
TCCGACACCT CGTTCTGGTT CTACGTGCTG CCGCTCGGCT TCCTGCTGAC CCAGTACACG
ATCACCGGCT TCGACGCCTG CGCGCACGTC TCGGAGGAGA CCCATGGCGC CTCGAAGGCG
GCGGCCCGCG GGCTCTGGCA GTCGATCTTC TACTCCGCGA TCGGCGGCTG GGTCCTGCTG
CTGGCGTTCC TCTTCGCGGC CACCGACGTG GACGCGGTCA ACAAGGAGTT CGGCTTCGTG
GGGGCCATCT TCACCTCGTC GCTCACCCCG GTCCTGGCCA CGGTGATCTT CGGAATCTCC
ACGATCGGGC AGTTCTTCTG CGGGATGAGC TGCGTGACCT CGATGTCCCG GATGACCTAC
GCGTTCTCGC GGGACGGCGC CATCCCCGGC TGGCGGCTCT GGTCGAAGGT CAACAAGAAC
CGGACGCCGG TCAACGCGAT CGTGTTCGGC TGCGTCGCGG CCCTCATCCT GACCCTCCCC
GCCCTCTACA AGGCCCCGAC CGGCACCCCG CTGGCGTTCT ACGCGGTCGT CTCTGTCGCG
GTCATCGGCC TCTACATCGC CTTCGCCATC CCGATCTGGC TCCGGCTGAG GATGGGTGAC
CGCTTCCAGC CCGGCCCGTG GACGCTGGGC GCGAAGTACA AGGTCATGTG CTGGATCGCC
GTCATCGAGA TCATCGTGAT CTCGATCTAC TTCATCATGC CGCTCGCCCC GGCGGGGGTG
CCGTTCAACA AGGACGACCC CGCCACGCCG GGGGACGAGA CGTTCACCTG GACCGCGGTC
AACTACTCGC CGATCGTGGT CGGGGTGATG GTCCTCGCCG TGGGCCTGTG GTGGGCGCTG
TCGGCCCGGC ACTGGTTCAC CGGGCCGCGC CGTACGGTCG ACGAGGATCA GCAGCCGGCC
GCCTGA
|
|---|
| Protein sequence | MTKPVPPADA DADARRLAEL GYKQELSRTW SGFSNFAISF SIISILAGCF TTFGQAWNNG
GPIAISWGWP LISIFILIIG LCMSELVSAY PTAGGIYWWA AKMGRPVHGW FTGWFNLVGL
VAVTASVDYG CATFMNITIN RFAEGFEISL GNTFILFTVI LVLHALINIF SHRLISLLQN
VSVWWHVFGA AVVVAILIFG PDSHQSMSFV FTERFNNSGF SDTSFWFYVL PLGFLLTQYT
ITGFDACAHV SEETHGASKA AARGLWQSIF YSAIGGWVLL LAFLFAATDV DAVNKEFGFV
GAIFTSSLTP VLATVIFGIS TIGQFFCGMS CVTSMSRMTY AFSRDGAIPG WRLWSKVNKN
RTPVNAIVFG CVAALILTLP ALYKAPTGTP LAFYAVVSVA VIGLYIAFAI PIWLRLRMGD
RFQPGPWTLG AKYKVMCWIA VIEIIVISIY FIMPLAPAGV PFNKDDPATP GDETFTWTAV
NYSPIVVGVM VLAVGLWWAL SARHWFTGPR RTVDEDQQPA A
|
|---|
| |