Gene Sros_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0662 
Symbol 
ID8663931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp674387 
End bp675793 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content73% 
IMG OID 
Productxylanase/chitin deacetylase-like protein 
Protein accessionYP_003336428 
Protein GI271962232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACT ATGTGGACCC CTCCCGGGTC CAGGGGCTGA GCGTCCGGAC CATGAACGGA 
GGTGACACCG GCGACCGGCG CGTGCACGTG ACCTACCCCT CGATCGACGA CGCCCCCCGC
CTGTCCGAGA AGATCCGCCG GACGGTCACC GAGCGGCTCG ACCGGTTCAT CCGGGACACC
TCCATGAACA CCGCCCTCCC CCACCCGGAG TTCAACGTGG ACTGGCAGCT CGCCGCCGCG
TCCGACCAGG TGGTCGGCGT CCGGCTGCGC ACCGGCGAGT CCCTCGGAGC CGGCTGGTCG
GAGTCCCGCA CCACCGTCTG GTACGACCGG GTGGACAGGC GCGCCCTGGA CTCCACCGCC
CTCCTCAGGG ACGGCTCCGC GCTGGCCGAG CTGGCCCGGA TCGTCAGGGA GAGCCTGAAC
GACAGGGGGT CGCCAGTGGA TCCGCGCGCC GTCAGGCCGG ACGCGGAGCT GTTCGACTCC
CTCAGCTTCA ACCCGCACGG CGAGCTCGTC GTGGAGTTCG ACGACTACCA GGTGTCGGGA
GGGCCCCTCG GCCGGGTGGC GGTGGCCGTC CCGGCCGCCG AGGTGGCGCC GCTGCTGTCG
GCCACCGGCC TGCGGGCGCA GCGCGCGGCC GCGGGGACGG CGCGGACGTC TCCGCCGATG
GGGTCGGATG AATCCATCGA GGCGGCGAGC ACCGTCAAGC TTCCGGCGCG GAGCTCCAAG
GCGGGCAGCG TGGACTGCGC GAGGGTCAAG TGCGTCGCGC TGACCTACGA CGACGGGCCG
GGCCCGGACA CCGGGCGGCT GCTGGACATC CTCGCCGGTG CGGACGCCAG GGCGACCTTC
TTCAGCGTCG GCTCCAACGC CGCCGCCCGC CCCGAGCTGC TGCGGCGGAT GCGGCAGGAG
GGGCACCTGG TGGCCAACCA CACCTGGTCC CACCGCGACC TGACCTCCCT GTCCACCAGC
AGGATCGCCG ACCAGATCGA CCGCACCCAG TACACGATCA CCCAGACGAT CTGGCAGGTC
CCGACGCTGG TGCGCCCGCC GTACGGCGCG AGCAGCGTCC AGGTCGCCTC CGTGGCGCGC
AGGCTGGGCC TGTCGGTGGT CCGGTGGAGC GTGGACACCG AGGACCGGCG CGACCGCGAC
CCCGGGGCCA TCGCCGACCG GGCCGTCTCC CGGGCCAGGC CGGGAGCGAT CGTCCTCATG
CACGACGTCC ACGGCGCGAC CGTCGACGCG GCTCCCGAGA TCTTGCGCCG CCTGAAGGAG
AAGGGCTACA CCTTTGTCAC CGTCCCCGAG CTGTACGGCT CGCGCGGAAT GGAGCCGGGC
AGGACCTACG ACTCCGCCGC GTCCGGCGGC AGCTCGGGGA AGTCGGGCAG CGTAACGCGC
GCGCTGGAGA AGCAGGCGCT GCCATAA
 
Protein sequence
MINYVDPSRV QGLSVRTMNG GDTGDRRVHV TYPSIDDAPR LSEKIRRTVT ERLDRFIRDT 
SMNTALPHPE FNVDWQLAAA SDQVVGVRLR TGESLGAGWS ESRTTVWYDR VDRRALDSTA
LLRDGSALAE LARIVRESLN DRGSPVDPRA VRPDAELFDS LSFNPHGELV VEFDDYQVSG
GPLGRVAVAV PAAEVAPLLS ATGLRAQRAA AGTARTSPPM GSDESIEAAS TVKLPARSSK
AGSVDCARVK CVALTYDDGP GPDTGRLLDI LAGADARATF FSVGSNAAAR PELLRRMRQE
GHLVANHTWS HRDLTSLSTS RIADQIDRTQ YTITQTIWQV PTLVRPPYGA SSVQVASVAR
RLGLSVVRWS VDTEDRRDRD PGAIADRAVS RARPGAIVLM HDVHGATVDA APEILRRLKE
KGYTFVTVPE LYGSRGMEPG RTYDSAASGG SSGKSGSVTR ALEKQALP