Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0662 |
Symbol | |
ID | 8663931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 674387 |
End bp | 675793 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | xylanase/chitin deacetylase-like protein |
Protein accession | YP_003336428 |
Protein GI | 271962232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACT ATGTGGACCC CTCCCGGGTC CAGGGGCTGA GCGTCCGGAC CATGAACGGA GGTGACACCG GCGACCGGCG CGTGCACGTG ACCTACCCCT CGATCGACGA CGCCCCCCGC CTGTCCGAGA AGATCCGCCG GACGGTCACC GAGCGGCTCG ACCGGTTCAT CCGGGACACC TCCATGAACA CCGCCCTCCC CCACCCGGAG TTCAACGTGG ACTGGCAGCT CGCCGCCGCG TCCGACCAGG TGGTCGGCGT CCGGCTGCGC ACCGGCGAGT CCCTCGGAGC CGGCTGGTCG GAGTCCCGCA CCACCGTCTG GTACGACCGG GTGGACAGGC GCGCCCTGGA CTCCACCGCC CTCCTCAGGG ACGGCTCCGC GCTGGCCGAG CTGGCCCGGA TCGTCAGGGA GAGCCTGAAC GACAGGGGGT CGCCAGTGGA TCCGCGCGCC GTCAGGCCGG ACGCGGAGCT GTTCGACTCC CTCAGCTTCA ACCCGCACGG CGAGCTCGTC GTGGAGTTCG ACGACTACCA GGTGTCGGGA GGGCCCCTCG GCCGGGTGGC GGTGGCCGTC CCGGCCGCCG AGGTGGCGCC GCTGCTGTCG GCCACCGGCC TGCGGGCGCA GCGCGCGGCC GCGGGGACGG CGCGGACGTC TCCGCCGATG GGGTCGGATG AATCCATCGA GGCGGCGAGC ACCGTCAAGC TTCCGGCGCG GAGCTCCAAG GCGGGCAGCG TGGACTGCGC GAGGGTCAAG TGCGTCGCGC TGACCTACGA CGACGGGCCG GGCCCGGACA CCGGGCGGCT GCTGGACATC CTCGCCGGTG CGGACGCCAG GGCGACCTTC TTCAGCGTCG GCTCCAACGC CGCCGCCCGC CCCGAGCTGC TGCGGCGGAT GCGGCAGGAG GGGCACCTGG TGGCCAACCA CACCTGGTCC CACCGCGACC TGACCTCCCT GTCCACCAGC AGGATCGCCG ACCAGATCGA CCGCACCCAG TACACGATCA CCCAGACGAT CTGGCAGGTC CCGACGCTGG TGCGCCCGCC GTACGGCGCG AGCAGCGTCC AGGTCGCCTC CGTGGCGCGC AGGCTGGGCC TGTCGGTGGT CCGGTGGAGC GTGGACACCG AGGACCGGCG CGACCGCGAC CCCGGGGCCA TCGCCGACCG GGCCGTCTCC CGGGCCAGGC CGGGAGCGAT CGTCCTCATG CACGACGTCC ACGGCGCGAC CGTCGACGCG GCTCCCGAGA TCTTGCGCCG CCTGAAGGAG AAGGGCTACA CCTTTGTCAC CGTCCCCGAG CTGTACGGCT CGCGCGGAAT GGAGCCGGGC AGGACCTACG ACTCCGCCGC GTCCGGCGGC AGCTCGGGGA AGTCGGGCAG CGTAACGCGC GCGCTGGAGA AGCAGGCGCT GCCATAA
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Protein sequence | MINYVDPSRV QGLSVRTMNG GDTGDRRVHV TYPSIDDAPR LSEKIRRTVT ERLDRFIRDT SMNTALPHPE FNVDWQLAAA SDQVVGVRLR TGESLGAGWS ESRTTVWYDR VDRRALDSTA LLRDGSALAE LARIVRESLN DRGSPVDPRA VRPDAELFDS LSFNPHGELV VEFDDYQVSG GPLGRVAVAV PAAEVAPLLS ATGLRAQRAA AGTARTSPPM GSDESIEAAS TVKLPARSSK AGSVDCARVK CVALTYDDGP GPDTGRLLDI LAGADARATF FSVGSNAAAR PELLRRMRQE GHLVANHTWS HRDLTSLSTS RIADQIDRTQ YTITQTIWQV PTLVRPPYGA SSVQVASVAR RLGLSVVRWS VDTEDRRDRD PGAIADRAVS RARPGAIVLM HDVHGATVDA APEILRRLKE KGYTFVTVPE LYGSRGMEPG RTYDSAASGG SSGKSGSVTR ALEKQALP
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