Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0566 |
Symbol | |
ID | 8663835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 573839 |
End bp | 575002 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | formyl-CoA transferase |
Protein accession | YP_003336333 |
Protein GI | 271962137 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.347509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.594324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGAC CGCTGTCCGA CGTGGTCGTC CTCGACCTGT CCAGAGCACT CGCGGGCCCG CACGCGGCCA TGATGCTCGG AGACATGGGG GCGCGGGTCA TCAAGGTGGA GCAGCCCGGC TCCGGCGATG ACACCCGAAG CTGGGGCCCT CCTTTCGTGG GGCCTGAGGA CCGGCGCGAA TCGACCTACT TCCTGTCCTG CAACCGCAAC AAGGAATCAA TCGCGCTGGA CCTCAAGTCC GAGACGGGGC GTGACGTGCT CGGCCGGCTC GTCGGCCGGG CCGACGTGCT GGTGGAGAAC TTCCGTCCCG GCGTGCTGGC CCGCCTGGGC TTCTCCACCG AGCGCCTGCA CGAGCTCAAT CCCGCACTCG TGATCCTGTC GATCAGCGGC TTCGGGCACG ACGGGCCCGA AGGCGGCCGG GCGGGCTACG ACCAGATCGC CCAGGGCGAG GCCGGGCTCA TGATGCTGAC CGGCCCGTCG GCCGGGGAAC CGACGAGGGT GGGCGTCCCG ATCGGCGACC TGCTGGCAGG CATGTACGGC GCGTACGGCG TGGTCTCGGC GCTGCACGAA CGCGCGCGCA CGGGCAGGGG CCGAGTGGTG CGCACCAGCC TGCTCGCGGC GATCGTGGGG GTCCACGCCT TCCAGGGCAC CCGGTGGACG GTGGCCGGTG AGGTGCCGCG GCCGACCGGC AACCACCATC CGTCCATCTG CCCGTACGGC CTGTTCCACA CCGCGGACGC GCCCATCCAG GTGGCGGTCG GCAGCGACGG CCTGTGGCGG GCGTTCGCGC CGCTCGTCGG GCTGGATCCG GCCGACCCGC GGTTCGCGGT CAACGGCGAC CGCGTCGCCC ACCGGCGGCA GCTGATCGAC ACGATCGAGG CCGCCTTCGC CGCCGAACCC GCCGAGGTGT GGCTGGCGCG GCTCGACCGG GCGGGGATCC CCGCGGGCAG GGTCCGCACC CTCGACGAGG TGTACGAGTG GCCGCAAACC CGGTCGCAGG GGCTGCTCAT CGACGTCGAG CATCCCACGC TCGGCGTGGT GACCCTGCCG GGGCCGCCGC TGCGACTTGA CGACGCCCCG TACGCCGGGG GGCGGGACGG GCACCTGCCG CCACCGACCC TGGGCGAGCA CACCGACACG ATCCTGGCTT GGTTGGAGAC ATGA
|
Protein sequence | MTGPLSDVVV LDLSRALAGP HAAMMLGDMG ARVIKVEQPG SGDDTRSWGP PFVGPEDRRE STYFLSCNRN KESIALDLKS ETGRDVLGRL VGRADVLVEN FRPGVLARLG FSTERLHELN PALVILSISG FGHDGPEGGR AGYDQIAQGE AGLMMLTGPS AGEPTRVGVP IGDLLAGMYG AYGVVSALHE RARTGRGRVV RTSLLAAIVG VHAFQGTRWT VAGEVPRPTG NHHPSICPYG LFHTADAPIQ VAVGSDGLWR AFAPLVGLDP ADPRFAVNGD RVAHRRQLID TIEAAFAAEP AEVWLARLDR AGIPAGRVRT LDEVYEWPQT RSQGLLIDVE HPTLGVVTLP GPPLRLDDAP YAGGRDGHLP PPTLGEHTDT ILAWLET
|
| |