| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0545 |
|---|
| Symbol | |
|---|
| ID | 8663814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 550356 |
|---|
| End bp | 552152 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003336312 |
|---|
| Protein GI | 271962116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.226286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCC TCGTCGCTGT CATCGCGTTT GCCGGTGCGT TGCTCGCAGC CATTGCCACT
GTCGCCCTCA TCGGTCGGCT CCGCGCCGAG CCCAAGGGGT GGTTGATCGC CTGGAGTATC
ACGACGGCGG CCCTCTGCCT GTCACTCGGA GTAATCGCAA CCGGCCATTT AGTTGGGTTC
GGGGCAACCA CATTCCGGGT TTATCAGCTG ACCGGATCAT TGCTGGCCCC GTTGTGGCTG
GCCATCGGCA CCGTCCAGCT GCTGGCGCGC AAGTCCGGTG CCGGGTTCGC CTCCTGGCTC
GTGGGGATCG CGCTCACCAT CATCGCCTCG GTGATCATGA TGGTCGACCC GATCCTCCAG
GACACCACGT TCACCAAGTC CCTCCCGCCC GGCGGACGCC ACTGGGGACT GCTGCCGGGC
TATCTGCTCG GCGCCGCCCA CGTCGGCGTC GCGCTCGTCC TGCTGGGCGG CGTCGTGCTC
GCGGTCCTGC GCTGGCGCGG GGGCGACGAC TACGACGCCG ACAACATGCA CGCGCTCCTG
GCGCTCGGCC CGACCGGCCT GGCCCTGATC GGCGCCGTGA GCTTCACGGT CCCCGGGCTG
TTCACCGCGC TCCTCCTCTT CGTCACCGCC GCCGCGGTCT GGTACGTCGT GCTCCGCCCG
CTCGCGCCCT ACGAGGACGA GGACGAGGAC GACCAGCCGG AGGACGACTG GGAGGACCGG
CGGCCGGTCG GCCGCCGCGC GGCGTCCGAG CCCCGGGACG TGCAGGTCGC CGGCCGCCGC
GCCCTGCCCG AGGAGTCGCC CCGCCGCTCC GGGCTCGGCG ACCTGGTGGC CGAATACCGC
GCGGGCGAGC AGGACGTCGA CTACGCGGCG CGCATGCAGC GGCAGCCCCC CGTCCAGGGC
GACCCGTTCG GCGGCCCGGC CACCGGCACG TTCATGGCCG GCGAGTACGG CATGCCGTCC
CCCGGCCAGC CCGCGGGCGG CGGTGAATAC ACCCGGCAAC CCCCGATGAC CGGCCAGTTC
GGCATGCCGC CGGGCAACCA GGCGACCGGT GAGTACGACG TGCCGGTCAA CGAGTACGGC
AGGCCCACCG CTCCCGCCGC CGGCGGCCCG GCGGGCCCGG GCAGGCCGAC GGGCCCCAGC
ACCGGAGAGT TCGCCAGGCC CGACCCGCTC CACGGCGCCC AGCCCGGCGG CAGCCTCCAG
CCCATGCCCG CCGACCAGGC GTTCGGCGCC CCGACCGGTT ACGGCCAGAG CGCCGCTCCG
GGGTACGGCG GCGCTCCGGG GTACGGCCAG GGCTCCGATC AGGGACTCGG CGGCGCTCCG
GGGTACGGCC AGGCGCCGGA CCGCGGTCTC GGCGGCCCGA CCGGTTACGG CCAGAGTGCC
GCTCCGGGCC TCGGCGGCCA GCCCGCGGCC GGTTCCGCCT ATCCGGGCGC GGCGGCCGAC
CAGCCGGGCG GCTCCTCCCG CCCGTCACCC GGCATCTTCG GCCTGCTGAC CGTGTTCACC
CTGATCGACG GCACCGGAGA GGCGTTCGAC CGGCTGGCCG AGGAGACGCT TGAGGCCGTC
CGCCGTTCCG AGCCCGACAC GCTCGTCTAC GTGTGCCACT CGGTGAAGTC GGCCCCGCTC
CAGCGCATCG TCTACGAGCT CTACCGCGAC GAGGTCGCCT ACACCGAGCA CCAGCGCCAG
CCGCACGTGG AGCGTTTCGT CAGCGAGCGG CAGAACATGG TGCTCGCCAC CAACGTGATC
GAGCTCAACG TCAACGCCGC GAAGGTGATG CCGCTCCCGA TGGCCTTCAG GCTCTGA
|
|---|
| Protein sequence | MEVLVAVIAF AGALLAAIAT VALIGRLRAE PKGWLIAWSI TTAALCLSLG VIATGHLVGF
GATTFRVYQL TGSLLAPLWL AIGTVQLLAR KSGAGFASWL VGIALTIIAS VIMMVDPILQ
DTTFTKSLPP GGRHWGLLPG YLLGAAHVGV ALVLLGGVVL AVLRWRGGDD YDADNMHALL
ALGPTGLALI GAVSFTVPGL FTALLLFVTA AAVWYVVLRP LAPYEDEDED DQPEDDWEDR
RPVGRRAASE PRDVQVAGRR ALPEESPRRS GLGDLVAEYR AGEQDVDYAA RMQRQPPVQG
DPFGGPATGT FMAGEYGMPS PGQPAGGGEY TRQPPMTGQF GMPPGNQATG EYDVPVNEYG
RPTAPAAGGP AGPGRPTGPS TGEFARPDPL HGAQPGGSLQ PMPADQAFGA PTGYGQSAAP
GYGGAPGYGQ GSDQGLGGAP GYGQAPDRGL GGPTGYGQSA APGLGGQPAA GSAYPGAAAD
QPGGSSRPSP GIFGLLTVFT LIDGTGEAFD RLAEETLEAV RRSEPDTLVY VCHSVKSAPL
QRIVYELYRD EVAYTEHQRQ PHVERFVSER QNMVLATNVI ELNVNAAKVM PLPMAFRL
|
|---|
| |