Gene Sros_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0476 
Symbol 
ID8663745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp474721 
End bp475947 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_003336245 
Protein GI271962049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCG CCGTCGAAAT CTGGCCTTTC CGCCCGTCCC TGCGATACGC CCGCCAGCTC 
GCCGAGGCAC TCCGCGCCGA GACCGTCGGC GGCGTCGTCA TGCTGCTGGC CACGGTCGCC
GCCCTGGTCT GGGCCAACGT CTCCACCGAC TCCTACGAGG CGCTCCGCAA CGCGAGGTTC
GGCCCGGACT TCCTCCACCT CGACATGGAA CTCTACAAAT GGGTCCAGAA CGGCCTGCTC
ACGGTCTTCT TCTTCATCGC CGGGATCGAG GTCAAGGAGG AGTTCGTCCA CGGTGAGCTC
GCCCAGCTCC GTAAGGCCGC ACTGCCCATC GTCGCCTCGA TCGCCGGCAT GGTCGTCCCC
GCCCTGATCT ATCTCGTGGT GAGCTGGGGC GTGCCGGGGG CGGGCCGCGG CTGGGCCATC
CCCACGGCCA CCGACATCGC CTTCGCCCTG GCCGTACTGG CCGTGACGGC CAGCGCGCTG
CCCGCAGCGC TGCGGGCGTT CCTGCTGACC AGCGCCGTGG TGGACGACCT CGGCGCGATC
ACCGTCATCG CCGTCTTCTT CACCCGGAAC CTGAATCTCC TGGCGCTGCT GGCCGGGGTG
GCGGTCATCG CCCTGTACGG CCTGCTGCAG GCCAGGCGGG TCCGCGGCCT CTGGATCTAC
CTGCCGCTCG CCCTCCTGGC GTGGTATCTC GTGGAGATCA GCGGTGTTCA CGCGACCGTC
GCCGGGGTAG CCCTCGGCCT GATGACCCGC GTGCACAGCG GCCCAGGCGA GGAGAGCTCC
CCCGCCGAAC TGGCCGACCA CTACATCCGC CCCTTCTCGG CGGGCTTCGC GGTGCCCGTG
TTCGCCTTCG TGTCCGCGGG GGTCGTGCTC AGCGCGGGGA GTCTCGGCGC GATGGCCACC
GACCGGGTGG TGCTCGGGGT GATCGCCGGC CTGGTCGTCG GTAAGTTCCT GGGCGTCTTC
GGCGGGGCGT GGCTGGCCGT ACGGCTCGGC TTGGCGAAAC TGTCGGATGA ACTGCACTGG
CGGGACATGG CCGCCGTGTC GATTCTGGCC GGGATCGGGT TCACCGTTTC CCTTCTCATC
GGTGACCTGG CCTACGGCGA CGATCCCGGA CGAGTCGACG CGGTGACCAC CGGGGTGCTC
CTGGCGAGCC TCACGGCCTC GGTCGTCGCG GCGGTCCTGC TCCGGGTGCG CGTGCGCAAC
CACCTCAGCG CGCAGGATGA TGTCTGA
 
Protein sequence
MRRAVEIWPF RPSLRYARQL AEALRAETVG GVVMLLATVA ALVWANVSTD SYEALRNARF 
GPDFLHLDME LYKWVQNGLL TVFFFIAGIE VKEEFVHGEL AQLRKAALPI VASIAGMVVP
ALIYLVVSWG VPGAGRGWAI PTATDIAFAL AVLAVTASAL PAALRAFLLT SAVVDDLGAI
TVIAVFFTRN LNLLALLAGV AVIALYGLLQ ARRVRGLWIY LPLALLAWYL VEISGVHATV
AGVALGLMTR VHSGPGEESS PAELADHYIR PFSAGFAVPV FAFVSAGVVL SAGSLGAMAT
DRVVLGVIAG LVVGKFLGVF GGAWLAVRLG LAKLSDELHW RDMAAVSILA GIGFTVSLLI
GDLAYGDDPG RVDAVTTGVL LASLTASVVA AVLLRVRVRN HLSAQDDV