Gene Sros_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0327 
Symbol 
ID8663595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp316084 
End bp317388 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content73% 
IMG OID 
ProductAcetylornithine deacetylase/Succinyl- diaminopimelate desuccinylase and related deacylase-like protein 
Protein accessionYP_003336102 
Protein GI271961906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCTC CCCCCTATCC CTCCCCGGAC CCGGCCGCCT CCCAGGCTCC GGACCCGGCT 
TCCCCCGCAG ACCCGGCTTC CTCCTCGGCC GTCACCCCCT CTCAGGCCCC CGCTCCCTCC
CCGGACCCGG CTTCCTCCCC GGACCCGGCT TCCTCCCCGG ACCCGGCTTC CTCCTCGGAC
CCGGCCGCCT TGCCCGACAT GGCTTCCTTC CTGGACAGGG CCCGGGAGCT GCTCGCCGTG
CCGTCGACCG CCGATCGGCC CGGCGAGCTG CACCGGGCGC TCGACCTGGT GCTCGGATCG
GTCGGATCCG GTTTCACGGT GGAGCGGTTC GAGTCCGGCG GCAAGCCGAG CGCGCTGGTC
TACCGCGACG CGGAACGCCC GCGCTTCCGG GTCGTCCTCA ACGCCCACCT CGACGTCGTG
CCGGCTCCCC CACACCAGTT CAGGCCGCGC CTCGACGGCA CCCGCCTCTA CGCCCGGGGC
GCCCAGGACA TGAAGGTGTC GGCGCTGGTG CAGGCCCAGG TCTTCCGCGA GCTGGCCGGC
GGCCTGCCGT ACCCGATCGC GCTGCAGCTC GTCACCGACG AGGAGGTCGG CGGGCGCGAC
GGCACGCTGC ACCAACTGGA GCAGGGGGTC GTCGGCGACT TCGTCGTCAT CGGCGAGCAG
AGCGGGCTAC GCGTGGTGAC CGACTCCAAG GGCATGATCA CCGCGGACCT GCGGGCCACC
GGCCGGAGCG CCCACGGCGC CTACCAGTGG CTCGGCGACA ACGCCCTGCT CAAGCTGGTC
CGCAGCCTGG ACAACCTGCT GGCCAGGTAT CCCGCCGCCA CCGAGGAGGT CTGGCGGACG
ACCGTCAACG TCGCACGGAT CGAGACCCCG AACGAGGCCC GAAACCAGGT CCCGTCCCTG
GCGGAGGCGT GGCTGGACAT CCGCTTCCCG GCCCGGGACG CGGACCTGGA CGGCAGGAGC
GCCGAGGAGA TCACGGCGTA CCTGGCCGCC TTCTGCGAGC CCGGGGTCAC TCCCGTCGTC
CACCACGTCG ACCCGCCCCA CCATGCCGAC CGGGACCGTC CCGAGGTGCG CGGGCTCCAG
CGGGCCGCGC GGAACCAGGG CTACCGCGCC GACTTCCTCC GCAAGCACGG CGCCGCCGAC
GGGCGCTTCT ACTACCAGCG AGGCGTCGAC GCCGTCATCT TCGGCATCGG CGGCGACGGC
CAGCACGGCC CCGACGAATA CGCCGACATC ACCACGATCG CGCCGTACTA CCGGGCGCTG
AAGGAGTTCC TCCTGGACCT CGGCACCATG CCCGCCCCTC CATGA
 
Protein sequence
MPPPPYPSPD PAASQAPDPA SPADPASSSA VTPSQAPAPS PDPASSPDPA SSPDPASSSD 
PAALPDMASF LDRARELLAV PSTADRPGEL HRALDLVLGS VGSGFTVERF ESGGKPSALV
YRDAERPRFR VVLNAHLDVV PAPPHQFRPR LDGTRLYARG AQDMKVSALV QAQVFRELAG
GLPYPIALQL VTDEEVGGRD GTLHQLEQGV VGDFVVIGEQ SGLRVVTDSK GMITADLRAT
GRSAHGAYQW LGDNALLKLV RSLDNLLARY PAATEEVWRT TVNVARIETP NEARNQVPSL
AEAWLDIRFP ARDADLDGRS AEEITAYLAA FCEPGVTPVV HHVDPPHHAD RDRPEVRGLQ
RAARNQGYRA DFLRKHGAAD GRFYYQRGVD AVIFGIGGDG QHGPDEYADI TTIAPYYRAL
KEFLLDLGTM PAPP