Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_998 |
Symbol | xerD4 |
ID | 8657929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 932861 |
End bp | 933769 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | integrase/recombinase |
Protein accession | YP_003330443 |
Protein GI | 270308385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGATG ATATACAAAG TTTTCTGAAC TACCTTATGG TTGAAAAGGG GTTTTCAGAA AATACCACCG AAGCTTACGA GAATGATCTT CGCCAGATGA TGACCTTTGC CGATAAAGAA GCCGCCAAGT TCGGCAAGAT ACCCGGCTGG GAAAACTTTA CCCGCCAGAC CATGCTGGCC TATATGCTGG ACCTTAAGGA GCGGAATTAC GCCATAACTA CGGTAGTCCG CAAGATGGCG GCCGCCAAGA GCTTTTTTAA CTTTATGGTT GCCGAGGGCA AGCTTAAAGA AAACCCTACC GAAAATATCA GTACTCCCAA AGTGGGCAAG CCGTTGCCTG ATGCTATCAG CATAAGCCAG GTCAGGGCTT TACTAAACCA GCCCGTCAAG TCCGGCAGTT CGGAAGCCAA GCGGGATAAG GCCATGCTGG AGCTTTTGTA TGCTTCGGGT ATGCGGGTTA CTGAACTGGT AAATCTTAAT GTATTGGATA TAGACCTGAA AGAAGGCTTT GTGCGCTGTT TCGGCAAGGG GCGCAAAGAA CGGATGATAC CTATTTATCC TCAGGCAGCA CAAAGCATTC AGGAATATTT AACCGAAATC CGCCCCAATC TGGTGCGGGC CGAAACCGAA AAAGCCTTGT TTTTGAACAG GCGGGGTGAC CGTTTGACCC GTCAGGGTTT GTGGCAGATT TTAAAGGGTT ATGCCCGTGA AGCCGGTCTG GATGACGTGG TTACCCCCCA TACCCTTCGC CACAGTTTTG CCACCCATAT GCTTTCCGGC GGGGCAGATT TGCGTTCGGT ACAGGAGCTG CTGGGTCATG CCAACATCTC TACTACCCAG ATATATACCC ACCTTACTTC CGAACATATA CGGCGGAGTT ATGAAAAAGC CCATCCCCGG GCAAAATAG
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Protein sequence | MRDDIQSFLN YLMVEKGFSE NTTEAYENDL RQMMTFADKE AAKFGKIPGW ENFTRQTMLA YMLDLKERNY AITTVVRKMA AAKSFFNFMV AEGKLKENPT ENISTPKVGK PLPDAISISQ VRALLNQPVK SGSSEAKRDK AMLELLYASG MRVTELVNLN VLDIDLKEGF VRCFGKGRKE RMIPIYPQAA QSIQEYLTEI RPNLVRAETE KALFLNRRGD RLTRQGLWQI LKGYAREAGL DDVVTPHTLR HSFATHMLSG GADLRSVQEL LGHANISTTQ IYTHLTSEHI RRSYEKAHPR AK
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