| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_979 |
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| Symbol | uvrD |
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| ID | 8657911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 909430 |
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| End bp | 911646 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003330425 |
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| Protein GI | 270308367 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGACA TACTTACAGG GCTGAACCCC GCTCAAAAAC AGGCCGTTGA AGTAGTGGAA
GGGCCGGTGC TTATACTGGC CGGTCCGGGC AGCGGTAAAA CCAGGGTTAT TACCCACCGG
ATTGCCTACC TTATTAAAAT AGTAGGTATA AACCCCCACC GCATTATGGC TGTTACCTTT
ACCAACAAGG CCGCCCGCGA AATGGAGACC CGCTTAAACC TGCTGGCTCC CTCAGCGGCG
GGACGCCTGA CTATGGGTAC TTTTCACGCT ATCTGCGCCC GCATACTCAG GCAGGACGGT
CTGCCTTTAG GTGTGCCGGC TGACTTTGTA ATATATGATG ATGATGACCA GCAAAGCCTT
ATCAAGCAGG CTATGGCAGA GCTTGAGCTG GACCCCAAGC GTTATCCGCC CGCTTCCATC
AGAAATGCCA TCAGCCAGGC CAAAAGCCAG CTGGTGCTTC CGGCGTATTA CTTTGAAAAA
GGCCGGAGCT ATTTTGAAGA AGTGGTAGGC AGGGTTTATG AACTCTACGA AAAACGCCTT
AAGCAGAACA AGGCACTGGA TTTTGATGAC CTGCTGCTGA AGGTTGTTCA GCTGTTCAAA
CAGCACCCTG AGGTGCTGGC CAGATATCAG GAACGTTATC TGCATGTAAT GGTAGATGAG
TTTCAGGATA CCAATCTGGT TCAGTATGAG CTGGTAAAGA TGCTGTCTGC CAAGTACAAA
AATATCTGTG TGGTGGGTGA CCCTGACCAG TCCATTTATT CCTGGCGTTC GGCAGACCTG
AGAAATGTCT TTAACTTTGA GACAGACAAT CCGGGTGCCA AAGTGATTTT GCTGGAGCAG
AATTACCGCT CTACTAAAAA TATTCTGGAA GCGGCTTCGT GTGTAATTGC CCCGAACAGC
GGGCGTAAAC CTATCAGTTT GTGGACTGAA AACGAATCCG GCCAGCCTAT AGCGGTAGTT
GAAACCTTTA ACGAGCAGGA AGAAGCCCAG TTTGTGGTTT CTGAAATTGA AAAACTGACC
CGGTATGAAA AGTTCAGTCC CGGTGATATA GCTATTCTTT ACCGTACCAA TGCCCAGTCA
CGGGCTCTGG AAGAGGCATT TATCCGCTAC GGCATGCCTT ACCGTCTGGT TTCCGGCACC
CGCTTTTACC AGCGGCGTGA GGTTAAAGAT ATTGTGGCTT ATCTGCGTTT GCTGCAAAAC
CCTCAGGATA GCGTCAGCCT CCAAAGGGTT ATAAACATAC CCACCCGCGG CATAGGGGCT
AAAACCCTTT CAGATTTGGG CCAGTTTGCC AGAGAGCAGG ATATCAGCCT GTATGAATCA
CTTGTAAATT TATCAGATGA AAATGCCCCC AAACCGCCCA TACCCAGCCG GGGCTTAAAA
CCCCTGACTG ACTTCGGTCT TTTACTGAAG TCACTGGTGG CGGATGCCCG TAATCTGCCC
CTTTTAAACC TGCTGGACAG GCTGCTTGAG GGCATAAATT ACCGTGAATT CCTGTTTGCC
TCCGAAGACG GGGAGGAGCG CTGGGATAAT ATACTTGAAC TGCGGACAGT TGCCCAGCAG
TATCAGGAAA TAGCCCCGCC CGAAGGGCTT TCGGCTTTTC TGGAAAGCGT GGCCCTGGTA
TCAGATTTAG ACAGCCTTGA AGAAGGTGTT TCGGCCGTTA CTCTTATTAC CTTGCATCAG
GCCAAAGGGC TGGAATACCC GGTGGTTTTC ATGGTGGGTA TGGAAGAGGG TGTCCTGCCA
CACAGCCGTT CGTTTGATGA CCCCGCCCAG ATGCAGGAAG AACGCCGCCT GTGTTATGTG
GGTGTAACCC GTGCCCGCAA GCGGCTTTAC CTGGTGCGGG CTTTCCGCCG CTCCCTTATG
GGGCAGAGCA ATGTAAACGA ACCATCACGT TATCTTAAGG ATATACCCCA GAGTATCATC
AAAGGCCGTG AAAAACAGCC CCCACCCGGG CAACATACTG CCGCTTCGGC AGCTTCACCC
GTTATCAAAC AGCGTCTGCA AAGTGCGGGC ATGTCCATTA AGTCAGCGTC TCCTCCCGCC
CCCAAACTGC TGGAACTTGA AGCGGGTGAT AAGGTGCTGC ACCCCCAGTT TGGCGAAGGG
ATTGTAACCA GTATCAACCG GGTGAAAAAT GATGCCGAGG TTATGATATC TTTCCATTCG
GTAGGCATGA AACGCCTGAT GCTCAGCTTT GCCCGCCTGA CCAAACTGGA AAACTAG
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| Protein sequence | MQDILTGLNP AQKQAVEVVE GPVLILAGPG SGKTRVITHR IAYLIKIVGI NPHRIMAVTF
TNKAAREMET RLNLLAPSAA GRLTMGTFHA ICARILRQDG LPLGVPADFV IYDDDDQQSL
IKQAMAELEL DPKRYPPASI RNAISQAKSQ LVLPAYYFEK GRSYFEEVVG RVYELYEKRL
KQNKALDFDD LLLKVVQLFK QHPEVLARYQ ERYLHVMVDE FQDTNLVQYE LVKMLSAKYK
NICVVGDPDQ SIYSWRSADL RNVFNFETDN PGAKVILLEQ NYRSTKNILE AASCVIAPNS
GRKPISLWTE NESGQPIAVV ETFNEQEEAQ FVVSEIEKLT RYEKFSPGDI AILYRTNAQS
RALEEAFIRY GMPYRLVSGT RFYQRREVKD IVAYLRLLQN PQDSVSLQRV INIPTRGIGA
KTLSDLGQFA REQDISLYES LVNLSDENAP KPPIPSRGLK PLTDFGLLLK SLVADARNLP
LLNLLDRLLE GINYREFLFA SEDGEERWDN ILELRTVAQQ YQEIAPPEGL SAFLESVALV
SDLDSLEEGV SAVTLITLHQ AKGLEYPVVF MVGMEEGVLP HSRSFDDPAQ MQEERRLCYV
GVTRARKRLY LVRAFRRSLM GQSNVNEPSR YLKDIPQSII KGREKQPPPG QHTAASAASP
VIKQRLQSAG MSIKSASPPA PKLLELEAGD KVLHPQFGEG IVTSINRVKN DAEVMISFHS
VGMKRLMLSF ARLTKLEN
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