| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_956 |
|---|
| Symbol | cobD |
|---|
| ID | 8657888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 890513 |
|---|
| End bp | 891436 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | cobalamin biosynthesis protein |
|---|
| Protein accession | YP_003330403 |
|---|
| Protein GI | 270308345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAACTG TATATATAAT TGTACTTGCC ATTGCTTTAG ACTTGGTACT GGGTGAATAT
CCCGCACCTC TTCACCCGGT AGTTTGGCTT GGCAAATTCA TATCCTTTCT GGATCGCTTC
AGCCCGTCCC GCAATCCTAA AACCCAGTTT ATTTACGGGG CATTCTTAAG CATACTAACC
GTAAGCATAT CCTTTACAGC GGTATTCTTC ATTCTGGGAT ATCTAAAAGA TTTTAACACC
CTGATCTATG TGTTTGCGGG AGGGCTGATA CTTAAACCCG CTTTTTGCCT TCGTGAGCAG
TGGGCAATAG CACTTAAAAT AAAAAAACTG CTTGAAAAAA ACAGCTCCGG TGCTCCGCCT
AAAGAACTGG AAACCCTGCT GGGCACAGTC CCGCATGATA AAGAAAGCCT TAGCCGTGAG
GATATTATCT CCGCTTCCAT ACGCTCCATC TCAGAAAATG CCAGTGATTT TTTCGTTGCC
CCCTTATTTT ACTTTATACT TTTGGGCATA CCGGGAGCAT TTGCCTACCG TGCTATAAAC
ACGCTGGACA GCATGATAGG TTTTCACGGC AAATACGAAT ATCTGGGCAA ATTTGCCGCC
CGTCTGGACG ACGTGGCTAA TTTCATCCCA GCCCGGCTGA CTGCTCTACT TTTTATAACC
GGTGCATTTA TCATTCACCA GAATCATAAA CAGGCACTTC GTTCTGCCAT TTCAGACCAT
GCCAAGACTA CCTCCCCTAA TGCAGGCTGG CCGATGGCCG CCATGGCAGG GGCATTGGAT
GTTTCATTGA AAAAGGCCAG ATGCTACACT ATGGGTAAAT CTCTCCGTCC GCTAAGTACC
CTATGTCTGA GTAGAGCGGC CAGACTTTAT AAAACCAGCA TGTTTATCTG GGCAGGCATA
TGCATAGCCA TAGTCTGGAT ATAA
|
|---|
| Protein sequence | METVYIIVLA IALDLVLGEY PAPLHPVVWL GKFISFLDRF SPSRNPKTQF IYGAFLSILT
VSISFTAVFF ILGYLKDFNT LIYVFAGGLI LKPAFCLREQ WAIALKIKKL LEKNSSGAPP
KELETLLGTV PHDKESLSRE DIISASIRSI SENASDFFVA PLFYFILLGI PGAFAYRAIN
TLDSMIGFHG KYEYLGKFAA RLDDVANFIP ARLTALLFIT GAFIIHQNHK QALRSAISDH
AKTTSPNAGW PMAAMAGALD VSLKKARCYT MGKSLRPLST LCLSRAARLY KTSMFIWAGI
CIAIVWI
|
|---|
| |