| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_948 |
|---|
| Symbol | |
|---|
| ID | 8657880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 883585 |
|---|
| End bp | 884715 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | glutamine amidotransferase, class II |
|---|
| Protein accession | YP_003330395 |
|---|
| Protein GI | 270308337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.155092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGACT TAACTAGAGT AAGCAATAGC CATTCGGACA GCAAGGTTAT AGATGCCTGT
TCGCTTTTCG GGATGATGGA TACCTCCGGA GGGCGTTTCT CCGGGGCTGA TTTGATTACG
GCCATCGGCA GTATGCATGA CCGTGGAAAC GGGCTTGGCG GCGGCTTTGC CGCTTACGGA
ATTTACCCTG ATTTTGCTGA AGAATACGCT TTCCATATCA TGTTTCTCAG CCAGCAGGCT
AAAACGGAAA CAGAGTGTTT TCTGGAAAGC TTTTTTAATC TGAAATACAA GGAAGAAGTT
CCTACCCGTG ACCAGCAGGG AATTACCAAC CCGCCCATTG TCTGGCGGTA TTTTGCCTCG
GTCAGCCCTG AAAAATGCGG CAAATTTATT GAAGAAGATT ACGTGGTAGA CCGCGTAATG
TACATAAACA CCTGCATAGA TGATGCCTTT GTTTTCTCAA GCGGAAAAAA CATGGGTGTC
TTTAAGGGTG TGGGCTATCC TGAGGATATC GGGCGCTTTT TTCGCCTGGA AGAATACGAA
GGTTATCTGT GGACTACTCA TGGACGCTTT CCTACCAATA CCAAAGGCTG GTGGGGAGGT
GCTCACCCGT TCTGCCTGCT GGACTGGACA GTGGTGCATA ACGGGGAGAT TTCTTCCTAT
GGTATAAACA AGCGTTTTCT GGAGCAGTAC GGATACAAAT GCACTATGGA AACCGATACC
GAAGTAGTAG CCTACGCGGT AGACCTGCTT ATGCGTAAGC ACGGTCTGTC TATTGAGCTG
GCGGCTAAAG TAATGTCTGC GCCTCTCTGG AATCAGATAG CCCGTTTGCC TGAACACGAA
CGCAAGATTA TGACTACTCT TCGCCAGATT TACGGCGGTT TGCTTTTAAA TGGTCCGTTT
ACAGTCATTG TGGCCCATAC CGGCGAAATG ATAGGTATGA CAGACCGTAT ACGTCTGCGA
CCCATGGTAG TGGGTGAATA TCAGTCAAAG CTGTTTATTT CGTCAGAAGA GTCTGCTATC
CGGTTGGTGC AACCGGAACT GGATAGAGTC TGGTTGCCCG TTGGCGGTGT TCCGGTAGTG
GGCAGCTTGA AAAATCCCAT CAAGGCGCAA AAGGAAGCTA CTGCATGCTG A
|
|---|
| Protein sequence | MRDLTRVSNS HSDSKVIDAC SLFGMMDTSG GRFSGADLIT AIGSMHDRGN GLGGGFAAYG
IYPDFAEEYA FHIMFLSQQA KTETECFLES FFNLKYKEEV PTRDQQGITN PPIVWRYFAS
VSPEKCGKFI EEDYVVDRVM YINTCIDDAF VFSSGKNMGV FKGVGYPEDI GRFFRLEEYE
GYLWTTHGRF PTNTKGWWGG AHPFCLLDWT VVHNGEISSY GINKRFLEQY GYKCTMETDT
EVVAYAVDLL MRKHGLSIEL AAKVMSAPLW NQIARLPEHE RKIMTTLRQI YGGLLLNGPF
TVIVAHTGEM IGMTDRIRLR PMVVGEYQSK LFISSEESAI RLVQPELDRV WLPVGGVPVV
GSLKNPIKAQ KEATAC
|
|---|
| |