| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_943 |
|---|
| Symbol | amt |
|---|
| ID | 8657875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 878492 |
|---|
| End bp | 879718 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_003330390 |
|---|
| Protein GI | 270308332 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCG GCGATACGAC TTGGCTACTT GTCTCCACCG CTCTGGTCAT GCTAATGACT
CCGGGCGTGG CTCTGTTTTA CGGAGGCATG GTCCGGCGTA AAAATCTGGT TTCCACCCTG
ATGATGAGCT TTGGCGCTAT GGCCCTGGGT GGCGTACTCT GGGTTCTGAT CGGCTACAGC
CTTGGTTTTG GTAACGATAT CAGCGGTCTG GTAGGTGGCC TGAACTTTTT GGGTTTAAAT
GGGGTGGGGC AAGACCCGTC TGACACTTAT GCAACTACTG TACCTCATTT AGCCTTCATG
ATGTTCCAGG GTATGTTTGC TATTATCTCT CTGGCCCTTA TTACCGGTGC AGTAGTAGAG
AGAATCCGCT TTAGCGCCTT GCTCCTGTTT GGAGCGCTCT GGCTTTGCCT TATTTACTCA
CCCATTGCCC ACTGGGTCTG GGGTGATGGC GGATGGTTAT TCAATCTGGG TGTTTTGGAC
TTTGCCGGCG GTACTGTTGT ACACATTAAC GCTGGTGTTT CCGCAATGGC TTTGGTGTTG
GCACTGGGTG CCCGCCGCGG TTTCCTTAAA GAACAAATGG AACCCAACAA CCTGCCCATG
GTTATGCTGG GTGCGGCTCT GCTCTGGTTC GGCTGGTTCG GTTTCAACGG CGGCAGCGCT
TTGACTGCCG GTGGTCTGGC TTCAAATGCT TTTGTTACTA CTAACACTGC AGCTGCCAGC
GCAGCTCTGT GCTGGATATT CCTTAGCTGG CGTCACCGCC GTCCGTCATT GCTGGGTGCT
GTTACCGGTG CAGTTGCCGG TTTGGTAGCT ATTACTCCTG CGGCTGGTTT TGTAACACCT
TTGGCGGCTA TCGCTATCGG TGCGGTGGCA GCTTTGGTTT GCTACGGTGC TATGATATTC
AAGATGAAAC GCGGATTTGA TGATTCCCTG GATGTTATGG CGGTACATGG TGTAGGCGGT
ATCTGGGGTG CTTTGGCAAC AGGTATCTTT GCCAGCGTAG CAGTAAACTC TGCCGGTGCT
GACGGTCTTT TGTTCGGTAA CGTGGAACTG TTCCTAAAAC AGGCTTTGGG TGTGGCTGTT
ACAGCCGGCT TTGCCTTCGT TGGCAGCTTC ATAATAGCCA AGGTTGTGGA TAAGCTGGTA
GGTCTGCGTG TTAAAGAACC CGAAGAAATG ATAGGGCTTG ATATTGCCCA GCACTCTGAA
CGGGCTTATG GTGGGAGTTT AAGATGA
|
|---|
| Protein sequence | MDSGDTTWLL VSTALVMLMT PGVALFYGGM VRRKNLVSTL MMSFGAMALG GVLWVLIGYS
LGFGNDISGL VGGLNFLGLN GVGQDPSDTY ATTVPHLAFM MFQGMFAIIS LALITGAVVE
RIRFSALLLF GALWLCLIYS PIAHWVWGDG GWLFNLGVLD FAGGTVVHIN AGVSAMALVL
ALGARRGFLK EQMEPNNLPM VMLGAALLWF GWFGFNGGSA LTAGGLASNA FVTTNTAAAS
AALCWIFLSW RHRRPSLLGA VTGAVAGLVA ITPAAGFVTP LAAIAIGAVA ALVCYGAMIF
KMKRGFDDSL DVMAVHGVGG IWGALATGIF ASVAVNSAGA DGLLFGNVEL FLKQALGVAV
TAGFAFVGSF IIAKVVDKLV GLRVKEPEEM IGLDIAQHSE RAYGGSLR
|
|---|
| |