| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_84 |
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| Symbol | rdhC |
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| ID | 8657038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 75451 |
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| End bp | 78705 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003329585 |
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| Protein GI | 270307527 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAC AACACACAAA GAATCGGACT TGTTGCATAT TATTAGCTGC GAGTTTTTTA
TGTGTTTTTT CCTTGCCCGA TAGAATTTTC GCTGCTGAAG ATAATATTAC TGAACATTTA
TCCAGCGATA TTGTGTTCGA AACAATCCCA GTTTTGAATA GTTTTAACGA AGATCTTGTC
TTTACCATCA CCCAGGACTC GTATGGTTAC TTTTGGTTTG GTACAAACAA TGGCCTTGCC
AAATATGATG GCATCAAAAC GACCATTTTT AAAAACGACT CTAGTAATCC TGCAAGTTTG
CCAGGTACAA GTGTGCAAAG TCTAGCATGT GGTTCAGATG GGACGGTATG GATTGGAACA
AACAATGGTT TATGCCGAAT CGATTCAGCC ACTAACCAGA TTAGCGTACT TAGCGGCCAA
AGCCAATCTG GCTGTAATAT AAATTCAATA AGTGCCAGCG ACATATCTGT TGATGCTTCT
GGAAATTTGT GGATTGGAAC TTGGGACAAT GGGCTTATCT ATTACAATAT ATCAAACAGC
AGTGTGCGCG AATTTAGTAG CAAGACTGGT TTCAATCTGA CCAGTGACCA TGTCTGGGAT
ATTTGCATAA GCCGGAATAA TCTCATTTGG TTTGGAACAG ATGACGGTAC ACTTGCCTGC
CTTTTACCCG AAAACGAAAA CTTGACTATT TATAATTATT CCCCAAACAA TACCTCGGGA
TTACCCGAAA ATAGAAGCAT TAACTCCTTA TTGGAAGATA ACACCGGAAA TTTGTGGTTT
GGCACAGACG GGGGTGGCCT TATTAAGTTT AATACGGGGA ATAGTACCTT CACCCAGTTT
AAACTGGGTT TATCGGTGTC GTCCTCCGTT TGGGATATTA TTTTGGATTC CAAAGGTATT
TTGTGGTTAG CTACCTTCGG TAATGGATTG GTAAAATTTG ATCTGGCAAC AGATACTTAT
ACTCATTACA AAGCAGATTC CATTAGTGAG TATGGCCTAA AAGACAATAC CATTTACAGT
ATTTTCCAAG ATCAGGATAA CCAAATCTGG CTATCAACCA GATATGCGGG TATCCAAAAA
TTTAAGTACT ATGACCACGG ATTAGACATA GTTACTATTT TAAATGAAGA TGGGAACCCT
ATACGAGAGA GTATAACAGC CATTATCACT GCCCCAAATG GTACTGTATG GATAGGTACA
GATGGCTTTA ATCTAATCCG CTATGAAACT CAAAGTGATC TTTTCAGACG TTATATTTAC
AATGCCCCAA TCGGGCAATA TATTGACAAC GATTTTATCA GTTCTCTAGC CATAGACAAG
CGAGGGAATA TCTGGATGGG TACATACTCA GGTAATTTGA TTGGCTTTTG TCCAGAAACA
GAGGACTTTA TAAATCCTAA CCTGGGAGCT CAGGAAATCG ACAGTGTCTC GGTAACCAGT
CTCCTTTACT CTTTCGAAAA AGATATCTTA TGGATAGGTA CGGTTTCTGG CACTATCTGT
TCTTTCAATC CACAAAATTT CGAATTTGTT AATTATTGGC AAGAATATGG AATATCGATG
CACTCCCGTA TAGAACAGAT CATAAACTAC GGCCCGAATA ATTTATTGTT GAAGACAGCG
GGCAATCTAT ACAATTTAAA TCTCTCCCAA CATGCTATTC AACCGATAAA TAATTTGCCA
CCCAACATTT CAAAATCCGA GATAATGGCT ATATACTTGG CGGGAGAAAA GATTTGGCTG
TGCGCGGATA AAATCTATTG TCTAGATTTA AATCTTAGGC TTATTTTTGA TCTGGATGTT
ATTCAAGATT ATCGTATATA CAATTGTACC CAGTTTGGCA CAGGAATTAT ATGGTTACAA
ACATCAAAAG GTATTGCCAA AATAGACCAA TACGAGGAAA GCATAAGTTA CTATAATTTA
AATGTGAACT GGACCTACGA TGCTTTAAGC AATAACTTCT GCTTCATAGA TGATAATAGG
TTGATTATCG GTAGTCGAAA TATCCTAATG ATGGTATACA CTCCCAATAT AACTCAAAGT
AATATCCCAT CTCAATTGAT TCTGAATTCA ATTCTGGCGG GAACTAGTAT GCTTCCAGCA
AGCGTGACAA ACAATAATGA AATAAATCTT TCCTATAAAC AAAATTATCT TGAGTTCAAT
TTTGTGCTAC TGGACTACCT AGATTCTACT CACAATGTCT ATGCTTACAA ATTAGAAGGA
TTTGACTCCA ATTGGCGTTA CACGGACTCA ACACAACCCC AAGCTGTGTA TCCAGATCTG
CCTGTAGGTC ACTATACTTT TAGACTAAAG GCAATGAACA GCGAAGGTTT ATGGACAAAT
ACAGAAACTC TGTTTAATTT TAAAATAGAT GCTCCTTTTT GGAATGAGCC GTGGTTCTAT
ATACTTTGCC TTGCAGGCTT TACAGGACTG GTTGAGATTA TTGTACTTAG CAGAACCCGC
TATATCTCCC AACAAAATCG CAAACTAGAG ATATTAGTCT ACAATCGCAC GAAGGCACTC
CAGAGAGAGA TACTCCGTCA AAAGAAAATT AGGTCGGCCC TTAACGAACA AATTCGCCGC
AGAAAAGCTC TAATAAATTC GTTAGTGCAT GAGCTTAGAA CCCCGCTCAC TCCAATTATT
GGTTCTTCTG AGATATTGCT TGAAAAACTA GAAGGAGATG CTCGTCTCTA TCGAGTGGCT
AAAAATATAA GTAGCGCAGC TGAAAGTATG AATCAACGAA TTCGTGATCT AGTAGACTCC
GCAAAGAGTG AAATAGGTAT GCTCAAGATA GAAAAACGTC CTGTGGATAT TCAGGAATTT
ATGAGTAATC TACAAGACTA TTTGGGAACT TGTGCCTGCA TAAAAAACCA AACATTTAAA
TTTGAAATCT CCCCCGACCC ACAAAATATT GCCATCGATG AAGATCGATT TCGCCAAGTT
ATGATAAACC TAATAAACAA TAGCATGAAG TTTTCTCCTT CTGGCAGTCA AATAGAAATA
ACGGCAGGAC CGGAAAATGA GCGCTGGCAC GTTAGCGTGA AAGACCAAGG TTGTGGAATA
GAGCAAAAAT ACTTGGGCAA AATTTTTAAG CCTTATTTCT GCATAAACAG CGCAAACAGA
GATTCTCAAG GTATGGGATT AGGTTTGTAT ATAGCCAATC AAATTATAAA ATTACATGGA
GGAAGAATTT GGGCAAAAAG TGAATTTGGG CAGGGAAGTG AATTCATAAT AGACTTACCA
ATGGATAGAA AATGA
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| Protein sequence | MKRQHTKNRT CCILLAASFL CVFSLPDRIF AAEDNITEHL SSDIVFETIP VLNSFNEDLV
FTITQDSYGY FWFGTNNGLA KYDGIKTTIF KNDSSNPASL PGTSVQSLAC GSDGTVWIGT
NNGLCRIDSA TNQISVLSGQ SQSGCNINSI SASDISVDAS GNLWIGTWDN GLIYYNISNS
SVREFSSKTG FNLTSDHVWD ICISRNNLIW FGTDDGTLAC LLPENENLTI YNYSPNNTSG
LPENRSINSL LEDNTGNLWF GTDGGGLIKF NTGNSTFTQF KLGLSVSSSV WDIILDSKGI
LWLATFGNGL VKFDLATDTY THYKADSISE YGLKDNTIYS IFQDQDNQIW LSTRYAGIQK
FKYYDHGLDI VTILNEDGNP IRESITAIIT APNGTVWIGT DGFNLIRYET QSDLFRRYIY
NAPIGQYIDN DFISSLAIDK RGNIWMGTYS GNLIGFCPET EDFINPNLGA QEIDSVSVTS
LLYSFEKDIL WIGTVSGTIC SFNPQNFEFV NYWQEYGISM HSRIEQIINY GPNNLLLKTA
GNLYNLNLSQ HAIQPINNLP PNISKSEIMA IYLAGEKIWL CADKIYCLDL NLRLIFDLDV
IQDYRIYNCT QFGTGIIWLQ TSKGIAKIDQ YEESISYYNL NVNWTYDALS NNFCFIDDNR
LIIGSRNILM MVYTPNITQS NIPSQLILNS ILAGTSMLPA SVTNNNEINL SYKQNYLEFN
FVLLDYLDST HNVYAYKLEG FDSNWRYTDS TQPQAVYPDL PVGHYTFRLK AMNSEGLWTN
TETLFNFKID APFWNEPWFY ILCLAGFTGL VEIIVLSRTR YISQQNRKLE ILVYNRTKAL
QREILRQKKI RSALNEQIRR RKALINSLVH ELRTPLTPII GSSEILLEKL EGDARLYRVA
KNISSAAESM NQRIRDLVDS AKSEIGMLKI EKRPVDIQEF MSNLQDYLGT CACIKNQTFK
FEISPDPQNI AIDEDRFRQV MINLINNSMK FSPSGSQIEI TAGPENERWH VSVKDQGCGI
EQKYLGKIFK PYFCINSANR DSQGMGLGLY IANQIIKLHG GRIWAKSEFG QGSEFIIDLP
MDRK
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