Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_814 |
Symbol | livK2 |
ID | 8657747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 757408 |
End bp | 758700 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | ABC-type branched-chain amino acid transport systems, periplasmic component |
Protein accession | YP_003330272 |
Protein GI | 270308214 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.888026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGGGC AAAACCGTAA ACAATTGATA AAGAGGGGAG CTTTGTCCTT TTTTAGCATG CTCCTTTTGC TTTTTTCAGT GGCGGCGGGG GGATGCGGTT CAAGTGATAC TGATGCTAAT AATCCTGACG GAACGGAAAA GCCTACTTTG AAGGTTGGTT TTTCAATACC ATATACCGGC CCGGCAGCTG AAAAAGGCTC TGTAATGGGG AATGCTAAAC TGGACGCAAT CAAGTACATA AATGAGGAAT TGGGCGGCGT AAACGGATAC CAGATAGAAG TCATCTGGCG TGATACCAAA TATGATTCTT CGCTTGCGGC AACGATTGTA CAGGAGATGA TGGATAAAGA TTGTCTGTTA TTCACTACCT GTGCCTCTAA GGAAATGCAA GCTTCTATGG AAATTGCCAA CCGGGCAAGT TTCCCCGGAT TTACCGTATT CAGTTCACCG GTCTGCACCC ACCCGGCAAA GCATATATAT GCACAGCTTC CGGATTACGG TGACAGCTGG GCATCATTTG CAAAATATTA CATGGAAAAT ATCTGGCAGG GTGAGGGTAC TCCTAAAATG GCCCTTATGA TACTCCAGAA TCCCACCGGT TATGGTGCGC GTGATGCCGC TAATGCCTTG GCGGCTGATT TGGGTATAGA GATAGTGGGT ATTTACGAAC ACTCTGCCAC TATCACAGAT GACACGGCGA ATCTTATAAA CCTTAAAAGT CAAAACCCGG ATGTAGTCTT TATCTCCAGT ACTCCCCAGC CTACGTCTGT CATCATCAAG CAGATGAACC AGATGGATAT CTATCCTGGG GTAACTGTCG GTTGCGGCCA TGCCGGATTT ACCAAAGCTC TTATAGATTT AGCTGGTGTG ACTAATACCG AAGGTATATA TGGCGTATAT CCTACCGTAA ACTGGGACGA AGATGTACCG GGAATGGCAA AAATGAAAGA ATACTGCCTG AAATATCACC CTGAAAACTA CGGCAATATG GATTATATTG CTTCATGGTC AGAGGGTTTG ATTGTCGCGG AGATACTTCG CCTTGCATTG ATAAATACCC CTGGGGGTAT AGATAATCTG ACTCCGCAAG CTATTGAGGA ATACGGAATA AAGAAGCTCA ATGGTTATAC TGTGGGTAGT TTGCAAGGGC CGGTTTCATA TGTCAGCGGC GATAACCGTC TGGCCAAAGC GGTCAGAGTG TTCCAAATAT CCGGTGGTGT AATGCAGGTC TTGAGTGATT GGGTAGAAGC ACCGCTTATC AGGTACGAGG ATTTTAGCTG GTTTGGCAGC TAA
|
Protein sequence | MLGQNRKQLI KRGALSFFSM LLLLFSVAAG GCGSSDTDAN NPDGTEKPTL KVGFSIPYTG PAAEKGSVMG NAKLDAIKYI NEELGGVNGY QIEVIWRDTK YDSSLAATIV QEMMDKDCLL FTTCASKEMQ ASMEIANRAS FPGFTVFSSP VCTHPAKHIY AQLPDYGDSW ASFAKYYMEN IWQGEGTPKM ALMILQNPTG YGARDAANAL AADLGIEIVG IYEHSATITD DTANLINLKS QNPDVVFISS TPQPTSVIIK QMNQMDIYPG VTVGCGHAGF TKALIDLAGV TNTEGIYGVY PTVNWDEDVP GMAKMKEYCL KYHPENYGNM DYIASWSEGL IVAEILRLAL INTPGGIDNL TPQAIEEYGI KKLNGYTVGS LQGPVSYVSG DNRLAKAVRV FQISGGVMQV LSDWVEAPLI RYEDFSWFGS
|
| |