| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_647 |
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| Symbol | dapF |
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| ID | 8657580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 605192 |
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| End bp | 606046 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003330115 |
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| Protein GI | 270308057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.55502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA CTAAACTGCA AAGTGTTGGC AATGACTTTG TTCTGGTAGA CCCGCAAGGT
GAAGAACGGG ATTGGCCAAA ACTGGCACTC CATATGTGCC ACCGTCATTT CGGTGCCGGT
GCTGACGGGC TGATGTTGCT TTTGCCTTCA GCAAAAGCAG ATTTCCGCAT GCGGATTTTT
AATGCAGATG GCTCTGAGGC AGAAATCTGC GGTAACGGTT TGCGCTGTCT TATTCATTAC
ATAGTCGCCA ACAAATTGAT TGGCAGCAGA GATGAACTTA GCATTGAGAC TCTAGCCGGT
ATACGGCATG CTCAAATATT TAAAGACGGA CGCATACGCA CCACCATGGG CAAACCTATG
TTTGAAGCCC ATCAGATACC TGTTGCCGCT GAACCAGACC CTAAACACTA CAGCGGACAA
CTTATTTCTG ACTTTCCGCT AAATATCAAT AACCGCCGGG TACTGGTTTC ACTGGTATCC
ATGGGAAACC CGCACGCTAT TCATTTTTGC ACTAAACCGG TAGAAGAATT CCTGCTGGGA
GAAGTGGGCT CATTGGTTGA AACCCACAAG GCATTCCCCA AACGCACCAA TTTCGAAGTT
GCAAATATCC TTGATACCGA ACATATAAAA GTACGGGTTT GGGAACGAGG GGTAGGGGAA
ACTCTGGGTT GCGGCAGCGG TGCTTCTGCA GTAGCGGTTG CCGCGCAGAT ACTGGGATAT
GTCGGTAAGT TTGTTTACAT AAAGTTGCCG GGCGGAACAC TCGGCGTTGA ATGGGATGGG
CATGATGATG TCTATCTTAC CGGAAAAGCT GAAATCATAT ATACGGGAGA ATGGTTGAAA
GATGAAATTG TCTAA
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| Protein sequence | MKFTKLQSVG NDFVLVDPQG EERDWPKLAL HMCHRHFGAG ADGLMLLLPS AKADFRMRIF
NADGSEAEIC GNGLRCLIHY IVANKLIGSR DELSIETLAG IRHAQIFKDG RIRTTMGKPM
FEAHQIPVAA EPDPKHYSGQ LISDFPLNIN NRRVLVSLVS MGNPHAIHFC TKPVEEFLLG
EVGSLVETHK AFPKRTNFEV ANILDTEHIK VRVWERGVGE TLGCGSGASA VAVAAQILGY
VGKFVYIKLP GGTLGVEWDG HDDVYLTGKA EIIYTGEWLK DEIV
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