Gene DhcVS_623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_623 
SymbolxerD3 
ID8657556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp585789 
End bp586712 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content49% 
IMG OID 
Productsite-specific recombinase 
Protein accessionYP_003330097 
Protein GI270308039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAGA ATTTTAACAA ATACCTTGAA TATCTGTCGG TAGAAAAAAA TGTTTCGGCG 
TATACCCTTA GAAACTACCG CACAGATTTG ATTGGTTTTG TTAACTACCT GATTGAAAAA
AAAGTGAGCT CTTTTGACAG GGTAGACCGC TATATCCTGC GGGACTATAT GTCCAGCCTG
ATAGCCAAAG GAATTGTTAA AGGCAGTATT GCCCGTAAAC TTTCGGCTGT ACGTTCTTTT
TACCGTTACC TTATGCGGGA AGGCCTTATC CAGAAAAACC CCACCCTAAA TGCCTCCAGC
CCCCGTCTGG ATAAACGCCT GCCGGAGTTT CTGACTACCG CTGAAGTTAG TAAACTGCTG
CGGATGCCGG ATTCATCCAC CCCCCAGGGT TTGCGGGACA AAGCATTTAT GGAGCTGCTT
TATGCCAGCG GCCTGCGGGT GAGTGAGCTG GTCAAACTGG ATATAGAAAA CCTGGATTTG
CACTCCCACC AGATACGGGT CTGGGGCAAA GGGTCTAAAG AACGCATAGT TCTGATGGGT
CTGCCGGCAA TCCAGTCTAT CCAAACCTAT CTAAACCTGG GCAGACCCTT GCTGAAAGGC
AAGCGGAATA CTCCAGCTTT ATTCCTTAAT CCAAATGGCG GCAGACTGAG TGCCCGCAGT
TTTCAGGAAA GGCTGGATAA ACTGGCACAC CAAGCCGGTA TTGAAAAACA CGTACACCCC
CACATGCTGC GCCATACCTT TGCCACTCAC CTGCTGGACG GCGGGGCAGA CTTAAGGGTA
GTACAGGAGC TACTCGGCCA CTCAAACCTT TCTACTACCC AGATATATAC CCACGTTACC
AAAAGCCAAG CCCGCAAAGT CTATATGTCC AGCCACCCGC TGGCCAAACC TCAGAATGAT
ACTTCAGGGA GTGAAGAGGA ATGA
 
Protein sequence
MQENFNKYLE YLSVEKNVSA YTLRNYRTDL IGFVNYLIEK KVSSFDRVDR YILRDYMSSL 
IAKGIVKGSI ARKLSAVRSF YRYLMREGLI QKNPTLNASS PRLDKRLPEF LTTAEVSKLL
RMPDSSTPQG LRDKAFMELL YASGLRVSEL VKLDIENLDL HSHQIRVWGK GSKERIVLMG
LPAIQSIQTY LNLGRPLLKG KRNTPALFLN PNGGRLSARS FQERLDKLAH QAGIEKHVHP
HMLRHTFATH LLDGGADLRV VQELLGHSNL STTQIYTHVT KSQARKVYMS SHPLAKPQND
TSGSEEE