Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_623 |
Symbol | xerD3 |
ID | 8657556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 585789 |
End bp | 586712 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | site-specific recombinase |
Protein accession | YP_003330097 |
Protein GI | 270308039 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAGA ATTTTAACAA ATACCTTGAA TATCTGTCGG TAGAAAAAAA TGTTTCGGCG TATACCCTTA GAAACTACCG CACAGATTTG ATTGGTTTTG TTAACTACCT GATTGAAAAA AAAGTGAGCT CTTTTGACAG GGTAGACCGC TATATCCTGC GGGACTATAT GTCCAGCCTG ATAGCCAAAG GAATTGTTAA AGGCAGTATT GCCCGTAAAC TTTCGGCTGT ACGTTCTTTT TACCGTTACC TTATGCGGGA AGGCCTTATC CAGAAAAACC CCACCCTAAA TGCCTCCAGC CCCCGTCTGG ATAAACGCCT GCCGGAGTTT CTGACTACCG CTGAAGTTAG TAAACTGCTG CGGATGCCGG ATTCATCCAC CCCCCAGGGT TTGCGGGACA AAGCATTTAT GGAGCTGCTT TATGCCAGCG GCCTGCGGGT GAGTGAGCTG GTCAAACTGG ATATAGAAAA CCTGGATTTG CACTCCCACC AGATACGGGT CTGGGGCAAA GGGTCTAAAG AACGCATAGT TCTGATGGGT CTGCCGGCAA TCCAGTCTAT CCAAACCTAT CTAAACCTGG GCAGACCCTT GCTGAAAGGC AAGCGGAATA CTCCAGCTTT ATTCCTTAAT CCAAATGGCG GCAGACTGAG TGCCCGCAGT TTTCAGGAAA GGCTGGATAA ACTGGCACAC CAAGCCGGTA TTGAAAAACA CGTACACCCC CACATGCTGC GCCATACCTT TGCCACTCAC CTGCTGGACG GCGGGGCAGA CTTAAGGGTA GTACAGGAGC TACTCGGCCA CTCAAACCTT TCTACTACCC AGATATATAC CCACGTTACC AAAAGCCAAG CCCGCAAAGT CTATATGTCC AGCCACCCGC TGGCCAAACC TCAGAATGAT ACTTCAGGGA GTGAAGAGGA ATGA
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Protein sequence | MQENFNKYLE YLSVEKNVSA YTLRNYRTDL IGFVNYLIEK KVSSFDRVDR YILRDYMSSL IAKGIVKGSI ARKLSAVRSF YRYLMREGLI QKNPTLNASS PRLDKRLPEF LTTAEVSKLL RMPDSSTPQG LRDKAFMELL YASGLRVSEL VKLDIENLDL HSHQIRVWGK GSKERIVLMG LPAIQSIQTY LNLGRPLLKG KRNTPALFLN PNGGRLSARS FQERLDKLAH QAGIEKHVHP HMLRHTFATH LLDGGADLRV VQELLGHSNL STTQIYTHVT KSQARKVYMS SHPLAKPQND TSGSEEE
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