Gene DhcVS_563 details

Gene Information

• Locus tag: DhcVS_563
• ID: 8657499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 529154
• End bp: 529903
• Gene Length: 750 bp
• Protein Length: 249 aa
• Translation table: 11
• GC content: 42%
• Product: radical SAM domain protein
• Protein accession: YP_003330040
• Protein GI: 270307982

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTTT ATCATCTGGC ATATGAGCCA AGTTACCATT CAATGGATTT TCATTTTTGG 
ACTGAATGTA ATTTAAAATG CCGCGGTTGT TATACCAATT ACGAGGTTTA CGATTTTGGT 
CTGCTGGATG ATCCTGTAGC TGAGATAATT ACCCGTGAAA GGCAAGCCCC TCCCACTAAA 
TTTCTAACGT TTGACCAGGT TATGGAAAAG ATAGATGGCT ATACTATAAA ATATGCGGTT 
TTTCTGGGTA CGGAGGCGGT GCTTGACTCT GAGCTGCCTA AACTGGCTAA GGCTGTCCAT 
GAAAAATACG GCTCTTACAA TATTCTGCTA ACCAACGGTA TCAGGATGCC TGACCTTACA 
GATATTGACC AGGTTATTTT CAGCCTGAAG GCGTATTCCG AAGATATATA TCGTGATTAT 
ACCAGCCGCT CAAATAAATC CGCGCTGGAA AACCTGAAGA AAATACATGC TTCATTAGGT 
GAGCGCAAAC TCCATGTAGA AGTGGTGTAC ATACCTGATT ATATAGCCAA AGACGAAATA 
GAAAAGGTAG CCCAGTTTTT AGCCAGCATA GATAAAGATA TGTCTTTCCG CATTGACGCT 
TATTTCCCTA TTCCGGGTTG TCCTTGGCGG GCGGCCAACA AGGAAGAAGT GGAAGAAGCA 
GCCGAAGTTG CCCGCAAGTA CCTGAACAAT GTAGTGGTAC TTACGTTGGA TATGAAACGA 
ATCGGTGATA AGGCAGTTAA GGTTTTTTAA 

 

Protein sequence

MKVYHLAYEP SYHSMDFHFW TECNLKCRGC YTNYEVYDFG LLDDPVAEII TRERQAPPTK 
FLTFDQVMEK IDGYTIKYAV FLGTEAVLDS ELPKLAKAVH EKYGSYNILL TNGIRMPDLT 
DIDQVIFSLK AYSEDIYRDY TSRSNKSALE NLKKIHASLG ERKLHVEVVY IPDYIAKDEI 
EKVAQFLASI DKDMSFRIDA YFPIPGCPWR AANKEEVEEA AEVARKYLNN VVVLTLDMKR 
IGDKAVKVF