Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_517 |
Symbol | lysU |
ID | 8657457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 485097 |
End bp | 486593 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | lysyl-tRNA synthetase (class II) |
Protein accession | YP_003329998 |
Protein GI | 270307940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.152204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAAG AATATCTGAA CGCTCAAAAA ACGGAAAAAC TAGAACGGAT AAAGAGCCGG GGTATAAACC CCTATCCAGC CACTTTCCAT CCCAGCCATA CCAGCGCACA AGCCGTAGCT TTGCTAGCGG AGCTTGAAAC ACAGGAAAAC CCGCCTAAAG AAACCCTGAG GATTGCAGGG AGAATTATGA CCCGGCGCGA CATGGGCAAG ATTTCCTTTA TGGATATACG TGACGGCAGC GGCAAAATAC AGATTTTCTG TCGTCAGAAT GATATGGACG AAGCGAGTAT AGAACTCCTT AAAGACCTGG ATTTGGGTGA TTTTATAGGC GCAGAGGGCA GCCTGATGCG TACCCGTACC GGTGAGCCCA GTCTGGCGGC TACCAGAATA ACCATGCTCT CAAAATCCCT ACTGCCTTTG CCGGAGAAAT GGCATGGCCT GCAGGATGTG GAAAAACGTT ACCGCCAGCG TTATCTTGAC CTTATTTCCA ATGCGGATGC CCGTCAGACA TTCCTTACCC GCAGCCGTGT TATAAGCGCC ATACGCTGTT TTATGAGTGC CAAAGAATTT CTTGAAGTGG AAACACCGGT TCTCCAACCT GAAGCAGGCG GCGCACTCGC CCGCCCCTTT ATTACCCATC ATCAGGCACT GGACTGTGAT TTTTACATGC GCATAGCTTT GGAATTGCAC CTTAAAAGGT TGATTGTTGG CGGTTTTGAC CGGGTATATG AGATAGGGCG GATATTCCGC AATGAGGGTG TCTCCACCCG CCATAACCCC GAATTTACCA TGATGGAAAG CTACCAGGCT TATGCTGACT ATAAAGACGT TATGGATTTC CTTGAGGAAA TGGTCTCAAG TGTGGTCAAA GAAATAAGCG GCGGATATAC TGTGCCGTTC GGGGATATTA CACTGGATTT TACTCCCCCG TGGCCCCGTC TGACCATACG TGATGCCGTA AAGCAATATG CCGGTATAGA TTTTTTTGAT TTCCCCACCA AAGAAGCCTT GGCCGCGGAA ATGACCCGCC GCAAACTGAA GGTAGACCCC GCCAAAGACT GGGGCAAACT GGTGGATGAG CTGGTAGGTG AATTTGTAGA ACCCCACCTT ATTCAACCCA CTTTCCTTAC TGACCACCCG GTGGCCATGT CTCCGCTTGC CAAACAGAAG CCGGAAGACC CCCGCCTGAC AGAGCGGTTT GAAGCCATTT GTGCCAATAT GGAAATAGCC AATGCCTTTT CCGAACTGAA TGACCCGGTA GAGCAAAGAG CACGTTTTAA GGAACAGCTT GAAAAACGCA ACCAGTTGCG CACTGAAGAG TTCGAAAGTA TAGATGAAGA CTTTCTGGCC GCACTGGCAT ACGGCATGCC GCCAACCGGC GGTCTGGGCG TGGGTATTGA CCGTTTGGTT ATGCTGCTGA CCAACCATGA CTCTATCCGC GAAGTTATTT TATTTCCTGC CCTGAAAGAT AGGGAAGACA CAAAAACACA GGAATAA
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Protein sequence | MPEEYLNAQK TEKLERIKSR GINPYPATFH PSHTSAQAVA LLAELETQEN PPKETLRIAG RIMTRRDMGK ISFMDIRDGS GKIQIFCRQN DMDEASIELL KDLDLGDFIG AEGSLMRTRT GEPSLAATRI TMLSKSLLPL PEKWHGLQDV EKRYRQRYLD LISNADARQT FLTRSRVISA IRCFMSAKEF LEVETPVLQP EAGGALARPF ITHHQALDCD FYMRIALELH LKRLIVGGFD RVYEIGRIFR NEGVSTRHNP EFTMMESYQA YADYKDVMDF LEEMVSSVVK EISGGYTVPF GDITLDFTPP WPRLTIRDAV KQYAGIDFFD FPTKEALAAE MTRRKLKVDP AKDWGKLVDE LVGEFVEPHL IQPTFLTDHP VAMSPLAKQK PEDPRLTERF EAICANMEIA NAFSELNDPV EQRARFKEQL EKRNQLRTEE FESIDEDFLA ALAYGMPPTG GLGVGIDRLV MLLTNHDSIR EVILFPALKD REDTKTQE
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