Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_461 |
Symbol | |
ID | 8657401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 428136 |
End bp | 429086 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | ABC-type transport system, ATPase component |
Protein accession | YP_003329943 |
Protein GI | 270307885 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00512826 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGCCA CTTCAAAAGC ACCGCCGGAA ATACCGGCTA TTGAAACCCT GGATTTAAGC CGCTCATACG GGCAACTTCT GGCAGTGGAC AAGCTGAACC TGAATATCCG CAATGGTGAA CTGTTTGCCC TGCTGGGCCC CAACGGGGCA GGCAAAAGCA CCACCATAAA TATGCTCTGC TGCCTGCTGA AACCCACCTC CGGCACAGCC CTGATAATGG GCTTTGATAT AAATACCCAA AGCTACCAGA TCAAGTCTAC TATCGGCAGT TCCCCTCAGG AAACCGCCAT TTCGGACCAC CTTACCCCGG TGGAAAATCT GGAACTATTC GGCAGGCTGA ACCGGGTAGA CCCCGTAAAA CTAAAGGAAT GGATACCCCG TTTTCTAGAG ATAATGGGGT TGGAAGACCG GGCAAAAAGC CAGGTACGCA CCTTTTCCGG TGGCATGAAA CGCCGCCTGA GCATAATGAT GGCACTTATC CACAACCCAG ACGTAGTCTT TTTAGATGAA CCCACCCTGG GCTTAGACCC CCAGGTACGC CACGCCATGT GGGAATATAT AAAATCTATG AAGGGGCAGA AAACTATACT CCTTACCACC CACTACATGG AGGAAGCAGA CCATCTGGCA GACCGCATAG GCATTATGGA TCAGGGCAAG ATAGTAGCAC TTGGAACACC GGTGGAGTTG AAACAAAGCC TCATAAAAGA ACCCACCATG AAGATACAGG CCTTTAATAT TTCCCAGAAA ATAGTAGCTG ATTTAAAAAC TTTCTACCCT AAAGTGGAGT TCTCAGGCGG AACACTTTCA GTTTCGGCAG AACACCTGGA GTTTAACGAG ATTGTAAACC GGCTGCAAAA TGCAGGGGCA GTTATCCGCT CTGCCCAGAT AAAAGACCCC AGCCTAGAAG ATGTCTACCT GAAACTAACC GGAAAGGAGC TGCGGCAATG A
|
Protein sequence | MAATSKAPPE IPAIETLDLS RSYGQLLAVD KLNLNIRNGE LFALLGPNGA GKSTTINMLC CLLKPTSGTA LIMGFDINTQ SYQIKSTIGS SPQETAISDH LTPVENLELF GRLNRVDPVK LKEWIPRFLE IMGLEDRAKS QVRTFSGGMK RRLSIMMALI HNPDVVFLDE PTLGLDPQVR HAMWEYIKSM KGQKTILLTT HYMEEADHLA DRIGIMDQGK IVALGTPVEL KQSLIKEPTM KIQAFNISQK IVADLKTFYP KVEFSGGTLS VSAEHLEFNE IVNRLQNAGA VIRSAQIKDP SLEDVYLKLT GKELRQ
|
| |