Gene DhcVS_312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_312 
SymbolproS 
ID8657255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp304332 
End bp306041 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content51% 
IMG OID 
Productprolyl-tRNA synthetase 
Protein accessionYP_003329799 
Protein GI270307741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTATT CCAGGTTATT TGGCAAGACC CAGCGTGAAA TCCCGTCAGA TGCCGAAACT 
ATAAGCCACC AGCTGCTGCT GCGTTCAGGC ATGATAGCCC AGCTAACCGC CGGAGTATAT
TCGTTTATGC CTCTGGCCTG GCGGTCTATC CAGAAAATTG AAAACATTAT CCGTCAGGAA
ATGAATAAAT CAGGCTGCCA GGAACTGGCC ATGCCGGTAC TCCAGCCGGT GGAAATATGG
CAGCAAAGCG GACGCGAAGC CCCCTTCGGG CAGACCCTTT TCCATTTGAA AGACCGCAAA
GACCGTAATC TGGTGCTTGG CCCTACCCAC GAGGAGGTTA TAACCGACCT TGCCAGCCGC
TATATCCAGA GTTACCGTGA CCTGCCCCAG CGGCTTTACC AGATACAGAC CAAATTCCGT
GATGAGCCAC GCCCCCGCGG CGGATTGATA CGGGTACGCG AATTTATTAT GAAAGATATG
TATAGTTTTG ATGCCAGCCC CGAAGGGTTG GACGAAAGCT ACCAGACCAT GAAACAGGCC
TATGAAAGCG TATACCGCCG CTGTGGTCTG GAATCTATGG TAATAGATGC AGACAGCGGA
GCTATAGGCG GAAAGGCCTC ACACGAATTT ATGATTGTGG CCGAAAGCGG CGAAGACAGT
ATCATCTACT GCCCGAAGTG CAATTATGCC GCCAATGCCG AAAAAGCAGT GTTCAAAAAG
AAAACCCTGC CCAAAGAACC CTTAAAAGAC TTGGAGGAAA TAGCCACCCC CGGCCAGAAG
ACTATTTCAG AGGTAGCCGC TTTTCTTTCA CTCAAACCGG AAAATACCCT CAAAGCAGTC
TTTTACATGG CAGACGGAAA GTTTGTGATG ACGGTCATAC GGGGAGACCT GGATATAAAC
GAAATAAAGC TGAAAAATCT GCTGAAGTGC AATGACCTGC GTCTTGCGGA AGACAGCGAA
GTAAAAGCCG CCGGAATAGC AGCCGGATTT GCATCACCCG TGGGGCTGAA AAATATCCTG
ATAGTGGCTG ATGACTCCGT TGAAAACGGC TCTAACTTTG TAGCCGGGGC TAACAAAGAC
GGCTTTCACT TGAAACACGT CAACTCCGGG CGGGATTTCA AGGCAGATAA AATGGCGGAT
ATTGCCCTGG CGGCCGAAGG TGCTGCCTGC CCCTTCTGTG ACGGCACTTT TGCCTCCAAA
CGGGGGGTTG AAGTGGGGCA TATTTTTAAA CTGGGAACAT TCCTTTCAGA ACGTTTCGGG
GCAAACTTCA CAGATGCCGA GGGCATCAGC CACCCGATAA TAATGGGGTG CTACGGCATG
GGGGTAGGAC GGCTGCTGGC CGCCGCCATA GAGCAAAACC ATGACGAAAA AGGCATTATC
TGGCCTATGC CTATTGCTCC GTATCAGGTA TATATCTGCG GGCTTTTCCT GGATAAACCG
GCAGTCAGCC AGGCGGCTGA AAAGATGTAT GCCGAACTGG AAGCCCAAGG TGTGGAAGTG
CTTTTTGACG ACCGCGAACT TACAGCCGGG GTCAAATTTA ACGATGCAGA CCTCTTAGGT
ATCCCCCTGA GGCTGACGAT AAGCCCCCGC AATCTGGATA AAGGCGGGGT GGAACTCAAG
CTCCGCCGGA ACAAAGAAGC CGAGTTGGTT CCACTGGATA ATATAGTGGA AAAGGTAATT
GCCACCATCA AATCCGAGAG CAACCTGTAG
 
Protein sequence
MRYSRLFGKT QREIPSDAET ISHQLLLRSG MIAQLTAGVY SFMPLAWRSI QKIENIIRQE 
MNKSGCQELA MPVLQPVEIW QQSGREAPFG QTLFHLKDRK DRNLVLGPTH EEVITDLASR
YIQSYRDLPQ RLYQIQTKFR DEPRPRGGLI RVREFIMKDM YSFDASPEGL DESYQTMKQA
YESVYRRCGL ESMVIDADSG AIGGKASHEF MIVAESGEDS IIYCPKCNYA ANAEKAVFKK
KTLPKEPLKD LEEIATPGQK TISEVAAFLS LKPENTLKAV FYMADGKFVM TVIRGDLDIN
EIKLKNLLKC NDLRLAEDSE VKAAGIAAGF ASPVGLKNIL IVADDSVENG SNFVAGANKD
GFHLKHVNSG RDFKADKMAD IALAAEGAAC PFCDGTFASK RGVEVGHIFK LGTFLSERFG
ANFTDAEGIS HPIIMGCYGM GVGRLLAAAI EQNHDEKGII WPMPIAPYQV YICGLFLDKP
AVSQAAEKMY AELEAQGVEV LFDDRELTAG VKFNDADLLG IPLRLTISPR NLDKGGVELK
LRRNKEAELV PLDNIVEKVI ATIKSESNL