| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1418 |
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| Symbol | |
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| ID | 8658343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1318351 |
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| End bp | 1321365 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | integral membrane efflux protein |
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| Protein accession | YP_003330845 |
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| Protein GI | 270308787 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.133612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCATA TTACCAAATT GGCATTACGT AGCAGACTGG TTACCATTTT TTTGGCATTG
GCAGTTGCCG GTGCTTCCTT GTGGGCATTT ATGGGCATCA AAGTAGAATT GATGCCTGAT
ATCAGCCTGC CCTATACCAC TGTGGTTACT GTGTATCCTC AGGCTACTCC GGATGCGGTG
GTCAGGGATG TTACTACCCC TATTGAAAGA TTTGTCTGGG ATGAGTGGGC AGATAAAGGA
CTAAAACACC TTACCTCAAC CTCTTCCGAA GGAATGTCAG TAATCATGGC CGAATTCGAA
TACGGCACAG ATATGACGGC GGTCGGTGAA AGCTTGAGCG AGGGCATCAG TAAAATCACC
TTCCCTCAGG CTGTTACCAA TTTCGCCGCC ATGATGGGGG CTAATGCCAA TAACCCCCAG
ATTATTCCTA TCAATATGAA TATTATGCCG ATGATAAGCC TGAGTTTGTC CGGGGATTTA
CCTCCGGACC AGCTGAAACA GATTGCAGAC AGCCAGATAG TCCCGTTGCT TTCCCAGATT
GACGGAGTAC TACGGGTGGA TACCGAGGGC GGGGAAAAGG ATTATATTGT AATCTCCCCC
AACCCCACCA AGATGACCCA GTACGGCATA ACCATTTCCC AGATTGCCGG CATACTTTCA
GCCGGTTATT CTTCCCTGAG TGATATTGAA CAGATTTCGC TGGGGATAAA CGGCATTAAG
CTGTCAGATA TTGCCACCGT TAGTCTCAGC CCTTCACCTT CTTCAGCTAT TACCCGTACT
AACGGCAAAC CCAGTGTAGG TATATCCGTA GTAAAAACAG AATCTGCCAA TACAGTTGAA
ACTGCCAATT CCATAAATGA AAAAATAGCG GGGCTGCAGG GGACACTGGA TGACGGCGTT
AGTATCAGCA CTGTTTTTGA CCAGTCAGAT TTCATTGATA CCAGCATCAG CCAGCTTGAG
GAAAAGGCGG TTGTGGGCGG TATTCTGGCG GTACTGGTGG TTTTTTTCTT CCTTTGGGCT
GTACGGGCAT CTTTGATAGC GGCCATATCT ATTCCCCTTA GCATATTCTT CGGTTTCCTG
TGCATGAGTT TATTTGGCAT TACCCTTAAT ATTCTTACCT TAAGTGCCAT GACCATAGCG
GTAGGGCGGC TTATTGATGA CAGTATAGTC ATAATAGAAG TTATCTACCG CCGTCTGCGT
GCCGGGGAAA GTTTCAAGGA GGCGGCTATC GGCGGTGCCA AAGAGGTAGC TACTCCCATT
ACTACGGCTA CTTTGGCCAC TGTGGCCATC TTTGCCCCCT TGATGTTTGT CGGCGGCATT
GTGGGTGAGA TGTTTATTCC TTTTGCACTT ACCGTGACTT TTGCCATGAT GGCTTCACTG
ATAGTTGCTT TGACCCTCAT TCCGGCGCTT TCCAAGTGGC TGGTCGGCTC CAAGCAGAAA
GCGGTTATCA CCAAAGACAA CTGGTATCAA AAAATTTATG TCAAGGCTTT GAAATGGACA
CTGGGGCATC GTCTGGCGGT AGTCACTACG GCGGTACTCC TGCTTATAGG CAGTACCGGG
CTTTTACCCA TGGCAGGTAC TTCATTTATG TCCGGTTCTT TCGGCGAAGA AACTATTTCT
ATCAATATCT CGCTGCCGGC TACATCTGAT GTCAATGCCA CCAGTGCCCT TACCGCCAAG
GTAGAAGCAT TGCTTGGTGC AAACCCGGCA GTCCGGAGTT ACAGCGCCAC TATCGGCACT
TCTGCCACTT CCATGGCCGG TATAATGAGT GCCTCTCAGG GCGGCGGTGG TGCCAATACA
GCCACTATTA TTGTTTACCT TAACAGTGAC GCTGATCTGC AAACAGAGCT CTCAAATATT
ACTCTGGCAA GCCAGAGCAT TAATACGGAC GGGGTTATAC AGGTCAGCTC CGGTTCCGGT
GACAGTATGG GCGGCAGTAT ATCCAGTTCT TCTATAAACC TTTCCATACA GGGGCAGAAT
CAGGAAGAGA TAGCCGCTAT TACTGCCCAG CTGCTGGAGA TGCTGAAGGG AGTTAGCGGC
CTGGAAGAAC TGAAAAGTGA CCTGACAACC GTGGTGCCGG TACTGAATAT TGCAGTAGAT
CCGGCAAAAG TAGCCACTTC AGGGTTGTCA CCTTCCCAGT TAGCCCAAAT GCAACAGGAA
TTTGTCCTTT TGATGAACGG CGGGGCACTA CCCGGTGTAA GCATTGCACT TGATAGCGGC
AGTTATCCTG TTTATTTCAA GGGTATAGCT GACAGCCTGA GTGACGCCGA ACAGGCTAAA
AATTTGAAAA TAGGTTTCCC GGTGGCAGTC ACTCTGAATG ATATTGCTAC CGTGGGCATA
GTGGCTGTGC CCTCACATGT AAGCCATACG GATACCATGC TTTCGGCTAC TATTACCGGA
ATTATAACTG ATGCTAATGT GGGTGCGGTA AATATGGCGG TTCAGGCACA GGTAGATGCA
TTGCCGCCCC ATCCCGGCGT AGAAGTGGTA ACTGCCGGTA TAGCCGAACA GATGGGTGAT
ACATTTATCC AGATGGGTAT TGCCATTCTG GTAGCTATTG CCATTGTATT CCTGATAGTA
ATACTGATGA TGCGTTCTAT CCGCAATCCC CTGCTTATCA TGTTAAGCAT ACCTTTGGCT
TTTATCGGCT CTATGCTGGC TCTGGTAATT ACCGGCTATA CACTGGGTGT ATCTGCCTTG
ATGGGTTTGC TGATGCTGGT GGGTATTGTG CTGACCAATG CCATAGTATT GGTATCCATG
GTAGAGCAGC AGCGTAAGCG CGGTCTTAGC GTCAAAGACG CCCTGATAGA GGGCGGCAAA
ATACGCCTGC GGCCCATTGT CATGACCGCT CTTACCACTA TATTGGCTAT GATTCCCATG
GCACTGAGTG TCAGTTCCGG TACTATGTTA AGCGCTGAAC TGGCAGTTGT GGTTATAGGC
GGTATGATAA GCTCTACTTT CCTGACCCTG TTTGTCATAC CGGCTGTGTA CAGTATGGTT
TACCGGGGTA AGTAA
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| Protein sequence | MWHITKLALR SRLVTIFLAL AVAGASLWAF MGIKVELMPD ISLPYTTVVT VYPQATPDAV
VRDVTTPIER FVWDEWADKG LKHLTSTSSE GMSVIMAEFE YGTDMTAVGE SLSEGISKIT
FPQAVTNFAA MMGANANNPQ IIPINMNIMP MISLSLSGDL PPDQLKQIAD SQIVPLLSQI
DGVLRVDTEG GEKDYIVISP NPTKMTQYGI TISQIAGILS AGYSSLSDIE QISLGINGIK
LSDIATVSLS PSPSSAITRT NGKPSVGISV VKTESANTVE TANSINEKIA GLQGTLDDGV
SISTVFDQSD FIDTSISQLE EKAVVGGILA VLVVFFFLWA VRASLIAAIS IPLSIFFGFL
CMSLFGITLN ILTLSAMTIA VGRLIDDSIV IIEVIYRRLR AGESFKEAAI GGAKEVATPI
TTATLATVAI FAPLMFVGGI VGEMFIPFAL TVTFAMMASL IVALTLIPAL SKWLVGSKQK
AVITKDNWYQ KIYVKALKWT LGHRLAVVTT AVLLLIGSTG LLPMAGTSFM SGSFGEETIS
INISLPATSD VNATSALTAK VEALLGANPA VRSYSATIGT SATSMAGIMS ASQGGGGANT
ATIIVYLNSD ADLQTELSNI TLASQSINTD GVIQVSSGSG DSMGGSISSS SINLSIQGQN
QEEIAAITAQ LLEMLKGVSG LEELKSDLTT VVPVLNIAVD PAKVATSGLS PSQLAQMQQE
FVLLMNGGAL PGVSIALDSG SYPVYFKGIA DSLSDAEQAK NLKIGFPVAV TLNDIATVGI
VAVPSHVSHT DTMLSATITG IITDANVGAV NMAVQAQVDA LPPHPGVEVV TAGIAEQMGD
TFIQMGIAIL VAIAIVFLIV ILMMRSIRNP LLIMLSIPLA FIGSMLALVI TGYTLGVSAL
MGLLMLVGIV LTNAIVLVSM VEQQRKRGLS VKDALIEGGK IRLRPIVMTA LTTILAMIPM
ALSVSSGTML SAELAVVVIG GMISSTFLTL FVIPAVYSMV YRGK
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