| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_117 |
|---|
| Symbol | |
|---|
| ID | 8657071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 114846 |
|---|
| End bp | 116150 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | LemA domain protein |
|---|
| Protein accession | YP_003329618 |
|---|
| Protein GI | 270307560 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAG TTTGTATTAT AGGCACTACT ACCTGGGGTA TTACTCTGGG TACAGTTATA
GCCCATAAAG GGCGTGAAGT AATGCTCTGG GCACGCACCG AGGACGAAGC CGCACTTCTT
TCTGCCCAAC GCCGCCCGGC TGACTTTTTG CCAGAAGATT ACCGTTTCCC TGAATTTATG
AATGTAACCG CCAATTTGGA AGATGCTATT ACAGGTTCAG ATATGATTCT GATGGCTGTA
CCTTCCCAGC GGATGCGTCC CAATATAAAG CTGGTTGCAC CTCTGCTGAC CAAAAACATG
CTGGTCTGCA GTGCCGCCAA GGGACTGGAA ATAGGTACTG CCAAACGCAT GAGTCAGGTA
ATTGCCGATG AGATTTACCC GGATTTTGCT AAAAATATCT GCGTTCTTTC GGGCCCTAAT
CTGGCTATGG AAATATTAAG GGGGCTACCG GCTGTGACTG TACTGGCTGC CGATACTGAA
AAGACAGCTA AAAAAGCCGC TAAACTGGTA ACCGCCAGCA ATTTCTGCGC CTACACTAAT
ACCGATATAA TAGGGGTGGA ACTGGGCGGC TCACTTAAGA ACATTATAGC TCTGGGAGCA
GGCATAGTGG ACGGGCTGAA TTTCGGCAAT AACGCCAAGA GTGCCCTGAT TACCCGCGGG
CTTACTGAGA TTTCTGCATT GGGAGCGGCT TTGGGGGCTA ACCCCCTGAC TTTTTCGGGT
CTGGCAGGTC TGGGTGACCT GATTGCCACC TGTTCCAGCA ATCTCTCCCG CAACCATTTT
GTGGGGGTGG AACTAACCAA AGGCCGCAGT CTGAATGACA TTATGTACAG CATGAGCAAT
GTAGCCGAGG GTGTTTCCAC TACTGCGGTA GCCTATGAAC TGGCCCGTTC TATGGATTTG
GAAATGCCGG TAACCGAAAA CATATATGAT GTGCTCTACA ATAATGCAGA CCCGAAGGAA
GCCGCCAGAA AGCTTATGGA TGCCCAAGCT GCCCATGAAC TGGCAGGACG AAAATGGAAC
CTGTTTAAAA TGTTCAGAAA ACGCAGAGCC CGCAAAACAC CCGAACTTAA CCCTGATTAA
|
|---|
| Protein sequence | MELQIWGYPV FALGLTALVL AFRTMRRKRL VDDIPTSRTR GVFIGLVELK GTAESEKPFT
GFLSAEKCVY YHYKVEERWS RMVTESYTDA KGHVQFRTHQ ESGWTQVASG KEMQPFYLKD
ETGIILIQPE GADIQPKNLF NKTCGRNDPL YYAKGPQGSV ANSDHQRRFT EEAIPLHAEL
YIMGQSRERQ DVVAPEIAKD KSAPLYVIST RTEKQISRSY SGWFWFWIIL GLLISLGSGL
LLSQQDKESF NPDWGIVALW SGFYLLSWLL GWLWAGYNSL VGLRNRVCQG YAQVDIQLKR
RFDLIPNLAK SVEGFSRHER ELQEMLAELR TVSKVNGQDT MDIKGASAIL VFNMEKYPEL
KADTVFLKLQ EELAATESRI ALARDYYNSI ATFYNTRREI FPDRLLAGIF GFKERVFINA
SELERAALKV KLAE
|
|---|
| |