| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1140 |
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| Symbol | pilM |
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| ID | 8658069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1052254 |
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| End bp | 1053711 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | Tfp pilus assembly protein ATPase |
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| Protein accession | YP_003330582 |
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| Protein GI | 270308524 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0194747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAA CAACTACGCT ATATATTGAA GATGCCGAAA TAAAGGTCCG TGTTAACAAC
GGTAAAAAGG TTGAAAAATG GGCCAGTGCC CCTCTTGAAG CAGGGCTGGT TGTAGACGGG
CTTATTCAGG ATGAAACCAA GGTTTCCGAA GAAATAAAGG CTCTGCTCAG CCGTGAAAAG
ATACCGGCAG GCAGAGTTAT AGCAGCTATG AGCGGTCTTA AATCTATCTT CCGTATTATT
ACCTTGCCGG CCGTACCAAA AAATATACTC GACGAAGCTA TTAAAAATGA GGCTAACCGG
GTAATTCCCA CCCCCATGGA CCAGAATTAC CTGTCTTACC AGATACTCCC TTCCGCTCAG
GGAGAAACCA AGGTATTTAT TGTAGCCCAC CCGAAAAACA CCACTGATTC CGTAATAAAA
ACAGTAAACA AAGCCGGGCT GAGGCTGGAA GTGCTGGATA TAGCACCGCT GTCTCTTTGC
CGCTGTGCCA ATATGGAAAA GGTTATTATT GTAAGCAACT GGCTGGATAA CGTGGATATT
GCCGTCATTA TTGACCGCAT CCCACAGGTT ATCCGCAGTT TGTCACTGCC TATTGAAAGC
CAGTCTCTAG CTGAGCGGAT AAGCACCATT GCCGAGGAAT TGGCCAGGAC TATCACTTTT
TACAATTCCA GTCACACCGA AAGCCCGCTG GATGAAAGCG TACCGGTGCT GGTCTCCGGT
GAACTGGCAA AAGAGCCTGA CTCATGGCCT TTACTGCTTG ATGAGCTGAG CAATCAGATT
TCCAGCCTGC CCTCCCCGTT TGTTGCCGGC GAAGACTTTG ACCCCAGCGT TTATATTGTA
AACATGGGTA CGGCACTGAG AGAGCTGCCT GTCGGGGCAG ATAACCAGAA TTCACTAATC
AACATTAACG CCATGCCGGG TTTTTACAAA CCCAAGGGCA CTTCCCCTGC AGCTGTACTT
GTCCCCACTG TGATAGTCCT TCTGGTAGGA GGGCTTGTCT GGGGCTGGTT TTATATTGAT
GATATGAAAC AAAAGAACAA CGCACTTGAA CCGCAGGTAC AGGCACAGGA AACTGCCCTG
GTACAAAAGA GAGCGGAACT TTCGACTATC AATACCCAGA TCGCCAACAC CCAGAAATCT
CTTGCCGAGG TAGAACCGGT GGTAACCGTG CTTAACAACA TGCTCTGGGA TATGTACCAG
GGGCGGGAAA CCATTACCGG CGACTATAAA GCCATTTACA ACCTTCATTC CAGCAATATC
ACCCTCTCAA CAATAAATTT TGACGGTGAA AGCATTACCG TAACAGGTTT CGGGCTGACA
AAGACAGCTA TTTTGGAATA TGCCGGCATA CTCCGCGGCA GCAACCGCTG GCTGGAAGTA
GTGGTAATCA GCATGAATAA GGTGCTTCCG GATGATCAAA GCCTGCCCAT ATACAGTTTT
GAATTCCTTT TAAAATAA
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| Protein sequence | MAKTTTLYIE DAEIKVRVNN GKKVEKWASA PLEAGLVVDG LIQDETKVSE EIKALLSREK
IPAGRVIAAM SGLKSIFRII TLPAVPKNIL DEAIKNEANR VIPTPMDQNY LSYQILPSAQ
GETKVFIVAH PKNTTDSVIK TVNKAGLRLE VLDIAPLSLC RCANMEKVII VSNWLDNVDI
AVIIDRIPQV IRSLSLPIES QSLAERISTI AEELARTITF YNSSHTESPL DESVPVLVSG
ELAKEPDSWP LLLDELSNQI SSLPSPFVAG EDFDPSVYIV NMGTALRELP VGADNQNSLI
NINAMPGFYK PKGTSPAAVL VPTVIVLLVG GLVWGWFYID DMKQKNNALE PQVQAQETAL
VQKRAELSTI NTQIANTQKS LAEVEPVVTV LNNMLWDMYQ GRETITGDYK AIYNLHSSNI
TLSTINFDGE SITVTGFGLT KTAILEYAGI LRGSNRWLEV VVISMNKVLP DDQSLPIYSF
EFLLK
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