Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1101 |
Symbol | |
ID | 8658031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1021920 |
End bp | 1022636 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330544 |
Protein GI | 270308486 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00638245 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTGG ATAATGTGAA AATCAGGTCG GACAGATTTC CGGATAATAG CGTTTATCCC TTTAATCTGG ATGTACTGCA TAAGACACCT CAGATAGTAT TAGACAGACC GGTTACCTTT TTCATTGGCG AAAACGGCAG CGGCAAGTCT ACCCTGCTTC GGGCTATTTG CCGTAAGGCT GGTGTGCATA TCTGGGAGGA TACCAGCCGC CTGACGCTGG ATAATAACCC CTATGCGGAT AGTTTGTCAG ACTATCTGGA GCTTGGTTTG CCTAAGGGCG GGGTAAAAGG CTCTTTTTTT GATTCACGCA CCTTTCAGGA CTTTACCCGT TTTCTGGATG AATGGGCGGC GGCTTCCCCG GATATTTTAA AATACTTCGG CGGGGACTCC CTTACCAACC GTTCCCACGG GCAATCGCTG ATGAAATACT TTGAATCACG CTATAAGGTA AAGGGATTGT ATTTTATGGA TGAACCTGAG ACAGCTCTGT CACCCAAAAG CCAAATCATG CTGCTGAACC TTCTGAGTCA GGCATCCGCC TCAGACCATA ATCAATTTAT TATTGTCAGC CATTCGCCTA TATTGCTGGC ATGTCCCGGT GCTTCTATAT ACACGTTTGA TACTGCACCT GTCTCCAGTA TAGGCTATTA CGATACCCAG TATTACCGGG TCTACCGTGA TTTTCTGAAT GAGCCGGAGT CATTTATTGA AAAGTAG
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Protein sequence | MFLDNVKIRS DRFPDNSVYP FNLDVLHKTP QIVLDRPVTF FIGENGSGKS TLLRAICRKA GVHIWEDTSR LTLDNNPYAD SLSDYLELGL PKGGVKGSFF DSRTFQDFTR FLDEWAAASP DILKYFGGDS LTNRSHGQSL MKYFESRYKV KGLYFMDEPE TALSPKSQIM LLNLLSQASA SDHNQFIIVS HSPILLACPG ASIYTFDTAP VSSIGYYDTQ YYRVYRDFLN EPESFIEK
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