Gene DhcVS_1 details

Gene Information

• Locus tag: DhcVS_1
• Symbol: dnaA
• ID: 8658445
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 259
• End bp: 1593
• Gene Length: 1335 bp
• Protein Length: 444 aa
• Translation table: 11
• GC content: 47%
• Product: chromosomal replication initiator protein DnaA
• Protein accession: YP_003329510
• Protein GI: 270307452

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCATA TAAAAAGCCC TTTAGCTTTG GAATTTGCCG GTTTCTGGCG GCGATTCGGA 
GCATTTATTA TAGACGACAT AATTATCAGT ATTATCTCTT CGGCCTTTGT ACCTGTACAC 
TGGTTTGAAA TACCGGTTTT CTGGAATATA GACAGCCTAT CCGGTATCTG GTGGCTGGCA 
GCCCCGGTTA TAGCATTTAC CAATGTGCTT TCGCTATCTG TTTTGGTAGC CTATTTTGTA 
TTTTTCTGGT ACTGGCGCGG ACAGACCCCC GGTATGATGG TTGCCCAGAT AAAAGTTATC 
CAGACAGACG GCTCAGGGGT TTCACTGGGA ATTTCCTTTA TCCGCTTTCT GGGGCTTATT 
CTGGCCAGCC TGCCCTTGGG ATTGGGGCTT TTCTGGATTG TCTGTGACCG CCGCAAACAG 
GGCTGGCATG ATAAAATGGC AAATACAGTA GTAGTCAAAC TACCCAAACC ACCTGAGATT 
ACCGCACCCC AAGCTACCTG A 

 

Protein sequence

MSIRPAQELW ETALGEIELQ VNKPNFRTWF AKTVGLKYDG SEFIIGVPNT FVAEYLEVNQ 
RSLIEKTLIN ITHSPVELGF QLVQSAQVPA AAPQTAREKT VSPFNPRYTF ESFIVGSCNR 
LAHAASLAAA QNPGKSYNPL YIYADAGLGK THLLQAIGHL ANLNRRKALY VSGEQFTTDF 
ISSIRNGQTE EFRARYRDVD LLLLDDVQFI GGKEQTEECL FHTFNDLHNS NRQIVISADS 
PPKSLPQLAE RLRSRFEWGL TIEIEPPDEK TRFELLQLKA EQSGAELNMD TLEYLAQEVK 
HNIRELEGSL NRVLAYARLL RATITPDLAA RALSDIGSRP VRENSPLRPS NIISAVSQVF 
QVPTTELLGA ARDKDTALAR QFAMFMLKQQ NSASLVEIGQ SLGGRSASTV SHACDKIQME 
LENSAFLRLK MSEVQNHLSQ QRLP