| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3137 |
|---|
| Symbol | |
|---|
| ID | 8650690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3474626 |
|---|
| End bp | 3475459 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003327696 |
|---|
| Protein GI | 269957907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.428202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG TCGACACTCT CCACGCCGCC CCGACGACCC CCCGGGCCGC CACGCGCCCG
GCGCCCGTCC ACTCGTTCGT GCGGGACACC GGGATCGTCC TGCTCCGCGA GCTGCGACCC
GTGCTGCGCG ACCCGTTCTC CCTCGTGTTC GGCCTGGTCC AGCCGCTCGT CTTCCTCGCC
CTGTTCGGCC CGCTGCTGGT CGGCTCGATG GGCGGGTCCA GCGCCCTCGG CGGCGACGTC
TGGCAGTGGT TCGTGCCGTC GATCCTGCTG ATGACGACGC TCTTCGGCAC GTCGACCACC
GGCTCCAACC TGCAGATGGA CATGCAGACG GGCTCTCACG AGCGGATGCT CGTCTCCCCC
CTCACCCGCT CGTCGCTCCT CGTGGGGCGG GCGCTGAAGG AGATGGTGCC GATCGTCGCG
CAGTCGGTGA TCGTGGTGCT CGTCATGATC CCGTTCGGGT TCCGGCTCGA CGTCGTCGGC
GCGGTGCTCG GGCTCGTCAT GCTGGCCGTG CTCGGCGTCG GGATCGGCTC GCTGTCCTAC
GCGCTCGCCC TCGCCGTGCG CAAGCAGGAG TGGATGTTCT GGATGGTGCA GCAGACGGTG
CTCTTCCCCG TGATGCTGCT CTCCGGGATG CTGCTGCCGA TCGAGACCGG TCCGCGGTGG
ATGCAGGTCG CCGCGCACGC CAACCCGCTC AGCTACGTGG TCGACGCGCA GCGCGCGCTG
TTCGCGGGCG ACCTGGCGTC CGGCGTCGTC GTGTGGGGGT GGGTCGCGGC CGGCGCGACG
GCGGCCGTGG GGCTCCTCGC CGGGATCCGG GCGATGGTGC GTAGCACCGA CTGA
|
|---|
| Protein sequence | MNTVDTLHAA PTTPRAATRP APVHSFVRDT GIVLLRELRP VLRDPFSLVF GLVQPLVFLA
LFGPLLVGSM GGSSALGGDV WQWFVPSILL MTTLFGTSTT GSNLQMDMQT GSHERMLVSP
LTRSSLLVGR ALKEMVPIVA QSVIVVLVMI PFGFRLDVVG AVLGLVMLAV LGVGIGSLSY
ALALAVRKQE WMFWMVQQTV LFPVMLLSGM LLPIETGPRW MQVAAHANPL SYVVDAQRAL
FAGDLASGVV VWGWVAAGAT AAVGLLAGIR AMVRSTD
|
|---|
| |