| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3117 |
|---|
| Symbol | |
|---|
| ID | 8650670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3455137 |
|---|
| End bp | 3456624 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_003327676 |
|---|
| Protein GI | 269957887 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TGCACGAGCG GACCGCCGTC GACCTGCGCG AGCTGCTGCT GGGCGGCAGC
GTGTCCCCTG TCGAGCTGAC GGAGCACTAC CTCGCGCGGG TCGCGGCTCG GAACGACCGG
CTCGGGGCGT TCGCCACCGT CACGGCCGAC GCCGCGCGCG AGCGGGCGGC CGCGCTGACC
CGGGAGCGGG CCGCCGGTGA GGCACTCGAC GACGACGTCG ACCAGGTGCT GTGGGGCCTG
CCCTCGGGCG ACAAGGACCT GTGGGACCGC GCCGGGGTGC CCACGGGCTT CGGGTCGCGG
GCGTTCGCCG GGCCGTACGC GTACGTGCCC GACGTGAGCA GCGACGTCGT CGCCCAGCTC
GACGCGGCCG GGACGGTCAG CCTGGGCAAG ACCGCCGCAC CCGAGCTCGG CTTCCCCGCC
TACACCGAAG GGCTCGGGTT CCCGCCCGCC CGCAACCCGT GGGACCCGAC GCGCACCGCG
GGCGGTTCCA GCGGGGGCGC GGCCGTCGCC GTCGCGGCCG GCATGCTGCC TTTCGCTCCA
GGGTCCGACG GCGGTGGGTC GATCCGCATC CCGGCGGCGG CCTGCGGCGT CGTCGGGCTC
AAGCCGACCC GCGGGCTGCT GCCGGCGGGT GGCGGCGTCG ACTCCGTGGG CGGACTGGTG
GTCACCGGGC CGATCGCCCG CACCGTCGCG GACGCCGCGC TGCTGCTCGA AGGGATGATC
GCGCGCGGTC CCGACGGCGC GGCGGCGCAC CCTTACACGC TGCGGCAGGC CGCCGGCGAG
CGGTGGTCGT ACGTGGACGC GGCGACGGGA GGCGCGGGCC GGAAGTTCCG CCTGGCGGTG
TCCACGTTCA GCCCGTGGAC CGGGTTCTAC GACATCACCC CCACCCCCGA GGCCCTCGCC
GCGCACTACG CCGGGGTGAC CGCGCTCGCC GGGCTGGGCC ACGACCTCAC GGATCTCGTG
CGCGAGCCCG ACGCGACCTA CGCGCCCGCG TTCCGCACCC TGTGGATGGC CGGCGCCGCG
GCCCTGCCCA TCGACGATCC CGAACGCCTC GCCCTGCTCG AACCGCTCAC CCGGTGGCTC
GTCGGCGTCG GGCGCAAGGT CACCGCCCGC GAGCTCGTCG AGGCGCTGCG GGCGCTCGCC
GCGTTCGAGC GCACCACGCT TGAACGCATC GCCCCGTACG ACGCCGTCGT GCTCCCGGCC
CTGGGCATGG TGCCGCCGGA GCTCGGCTGG TTCGACGCGC AGGATCCCGA ACGCAACTTC
GAGCAGCAGT GCCAGTTCAC GCCGTACACG TCGATGGTCA ACGTGACCGG GCTGCCCGCG
ATCACCGTGC CGACCCAGTG GACGGCACCC ACGCCCACGG CCCCGGCGGG GATGCCGATG
GGCATCCAGC TCGTGGGCCG CCCCGGCGGG GAGCACACGC TGCTGGAGAT CGCCGCCCAG
CTCGAAGACA CCCTGCGCTG GCCGGAGCGC CGTCCGCCGA CGTGGTGA
|
|---|
| Protein sequence | MTELHERTAV DLRELLLGGS VSPVELTEHY LARVAARNDR LGAFATVTAD AARERAAALT
RERAAGEALD DDVDQVLWGL PSGDKDLWDR AGVPTGFGSR AFAGPYAYVP DVSSDVVAQL
DAAGTVSLGK TAAPELGFPA YTEGLGFPPA RNPWDPTRTA GGSSGGAAVA VAAGMLPFAP
GSDGGGSIRI PAAACGVVGL KPTRGLLPAG GGVDSVGGLV VTGPIARTVA DAALLLEGMI
ARGPDGAAAH PYTLRQAAGE RWSYVDAATG GAGRKFRLAV STFSPWTGFY DITPTPEALA
AHYAGVTALA GLGHDLTDLV REPDATYAPA FRTLWMAGAA ALPIDDPERL ALLEPLTRWL
VGVGRKVTAR ELVEALRALA AFERTTLERI APYDAVVLPA LGMVPPELGW FDAQDPERNF
EQQCQFTPYT SMVNVTGLPA ITVPTQWTAP TPTAPAGMPM GIQLVGRPGG EHTLLEIAAQ
LEDTLRWPER RPPTW
|
|---|
| |