| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3107 |
|---|
| Symbol | |
|---|
| ID | 8650660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3443309 |
|---|
| End bp | 3445630 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_003327666 |
|---|
| Protein GI | 269957877 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.818593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCT CCGCCGTCCG CCCGACTCTC GACACCGTCG AGAACGCCGC TGCCACCCCG
GACGAGGTGC AGCCCTACGC GGAGCTCGGC CTCAAGCCCG ACGAGTACCA GCGCATCCGC
GACATCCTGG GCCGCCGCCC CACCGCGGCC GAGCTCGCGA TGTACTCGGT CATGTGGTCG
GAGCACTGCT CCTACAAGTC CTCCAAGGTG CACCTGAAGA AGTTCGGCGA GCGGGTCACC
GAGGAGATGA AGCGGCACCT GCTGGTCGGC ATCGGCGAGA ACGCCGGCGT CGTCGACATC
GGTGACGGCT GGGCCGTGAC GTTCAAGGTG GAGTCGCACA ACCACCCGTC GTTCGTGGAG
CCGTACCAGG GTGCGGCCAC CGGCGTCGGC GGCATCGTGC GCGACATCAT CTCGATGGGC
GCCCGCCCCG TGGCCGTGAT GGACCAGCTC CGCTTCGGCG ACGTCTCCCA CCCGGACACG
GCGCGCGTGG TGCACGGTGT GGTCTCCGGC GTCGGCGGCT ACGGCAACTC GCTGGGCCTG
CCGAACATCG GCGGCGAGCT CGTGTTCGAC GGCTCCTACC AGGGCAACCC GCTGGTCAAC
GCGCTGTGCG TGGGCGTGCT GCGCCACGAG GACATCCACC TCGCCAACGC GTCGGGCGTG
GGCAACAAGG TCATCCTGTT CGGCGCCCGC ACGGGTGGTG ACGGCATCGG CGGCGCCTCG
ATCCTCGCGT CCGAGACGTT CGAGGACGGC GTCCCCGCCA AGCGTCCGTC GGTGCAGGTG
GGCGACCCCT TCATGGAGAA GGTGCTCATC GAGTGCTGCC TCGAGCTCTA CGCCGCCCAG
GTCGTGGAGG GCATCCAGGA CCTCGGCGCC GCCGGCATCT CCTGCGCCAC CTCCGAGCTC
GCCTCGAACG GTGAGGGCGG CATGCACGTG TTCCTCGACG ACGTGCTGCT GCGCGACCCG
TCGCTCAACG CGGGCGAGAT CCTCATGTCG GAGTCGCAGG AGCGCATGAT GGCCGTCGTC
ACGCCGGACC GGCTCGACGA GTTCCTCGCG ATCACCAAGA AGTGGGACGT CGAGACGTCG
ATCGTCGGCG AGGTCAACGA CTCGGGCCGC CTGACGATCG ACCACCACGG TCAGCGCATC
GTCGACGTCG ACCCGCGCAC GGTCGCGCAC GAAGGGCCGA CGTACCACCG CCCCTACGCC
CGGCCCTCCT GGCAGGACGC GCTCGTCGCC GACACGACGG CGTCCCTGCC GCGTCCGACG
TCGGCGGCGG ACCTGCGCGC GACGGCGCTG CGCCTGCTCG CCTCCCCGAA CCTCGCCTCC
AAGGCGTGGG TCACCGACCA GTACGACCGG TTCGTGCAGG GCAACACCGC CCTCGCGCAG
CCCGACGACG GTGGCGTGAT CCGGGTCGAC GAGTCGACGC ACCTCGGCGT CGCTCTGGCC
ACCGACGCCA ACGGCCGCTA CGCGAAGCTC GACCCCCGCA CGGGCGCCCA GCTCGCGCTC
GCCGAGGCGT ACCGCAACGT GGCCGTCGCG GGTGCGACGC CGCTCGCCGT CACCGACTGC
CTGAACTTCG GCTCGCCCGA GAACCCCGAC TCGATGTGGC AGCTCGTCGA GGCGATCGAG
GGCCTGGCGG ACGCCTGCCA GGAACTCACC GTCCCGGTGA CCGGCGGCAA CGTCTCGCTC
TACAACGAGA CCGGCGAGCC CGGCCTGATC GACTCCGCCA TCCACCCGAC GCCCGTCGTC
GGCGTGCTCG GCGTCATCGA CGACGTGCGC ACCGCCGTGC CGTCCGGCTG GCGTGCCGCC
GGGCTGTCGG TGGTCCTGCT CGGCGCCACG GCCGACGAGC TCGACGGGTC CGCCTGGGCC
GACGTCGAGC ACCAGCACCT GGGCGGCGTG CCGCCGCGCG TCGACCTCGC GGCCGAGAAG
GCGCTCGCCT CGGTGCTGGT CGGTGCCCGC ACCGCCGGGC TCGCGGTCGC CGCGCACGAC
CTCTCCGAGG GCGGCCTGGT CCAGGCCCTG CTCGAGTCGT CGCTGCGCTA CGGCGTGGGC
GTTCAGGCGT CGGTCGCTCC CGTGGTCGAG CGGGACGGTG TCTCCGCGTT CGCCGCGCTG
TTCTCCGAGA CGACGGCGCG GGCGCTCGTC GCCGTCGACC CGGCCCGCGA GGCGGAGCTG
CTCGCCGCGG CGTCGGCCGC CGGGGTGCCC GCCCTGGCGA TCGGCACCAC GGGCGGGGAC
GCGGTCGTCC TTGCGGCGGC CGAGCCTGTC GAGACCATCA CCATCACGCT CGACGAGGCC
CGCGAGGCAC ACACCGGGAC GCTGCCGAAG CTCTTCGGCT GA
|
|---|
| Protein sequence | MSASAVRPTL DTVENAAATP DEVQPYAELG LKPDEYQRIR DILGRRPTAA ELAMYSVMWS
EHCSYKSSKV HLKKFGERVT EEMKRHLLVG IGENAGVVDI GDGWAVTFKV ESHNHPSFVE
PYQGAATGVG GIVRDIISMG ARPVAVMDQL RFGDVSHPDT ARVVHGVVSG VGGYGNSLGL
PNIGGELVFD GSYQGNPLVN ALCVGVLRHE DIHLANASGV GNKVILFGAR TGGDGIGGAS
ILASETFEDG VPAKRPSVQV GDPFMEKVLI ECCLELYAAQ VVEGIQDLGA AGISCATSEL
ASNGEGGMHV FLDDVLLRDP SLNAGEILMS ESQERMMAVV TPDRLDEFLA ITKKWDVETS
IVGEVNDSGR LTIDHHGQRI VDVDPRTVAH EGPTYHRPYA RPSWQDALVA DTTASLPRPT
SAADLRATAL RLLASPNLAS KAWVTDQYDR FVQGNTALAQ PDDGGVIRVD ESTHLGVALA
TDANGRYAKL DPRTGAQLAL AEAYRNVAVA GATPLAVTDC LNFGSPENPD SMWQLVEAIE
GLADACQELT VPVTGGNVSL YNETGEPGLI DSAIHPTPVV GVLGVIDDVR TAVPSGWRAA
GLSVVLLGAT ADELDGSAWA DVEHQHLGGV PPRVDLAAEK ALASVLVGAR TAGLAVAAHD
LSEGGLVQAL LESSLRYGVG VQASVAPVVE RDGVSAFAAL FSETTARALV AVDPAREAEL
LAAASAAGVP ALAIGTTGGD AVVLAAAEPV ETITITLDEA REAHTGTLPK LFG
|
|---|
| |