| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3053 |
|---|
| Symbol | |
|---|
| ID | 8650602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 3380432 |
|---|
| End bp | 3381703 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ATPase (AAA+ superfamily)-like protein |
|---|
| Protein accession | YP_003327613 |
|---|
| Protein GI | 269957824 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTACC GGCGACGGAC CATCGATGAC GCACTCGACG GCTTGTTCCC GCACCTCGCG
GCAATCGCGA TCGAGGGCGC GAAGGGCGTC GGGAAGACCG CCACCGCCGC CCAGCGGGTG
ACGACGGTGC TTGACCTGAG CCGAGGGCCG CTCCAGGAGA CGATCGCGGC AGACCCCGAC
CAGATCACTG CCGAGTCCCC TCCAGTCCTC ATCGACGAGT GGCAACTTGT GGCGCCGGTG
TGGGACGCCG TCAAGCGCGC CGTCGACCGG GATTCCGCGG GCGCCCAGTT CCTCCTCGCT
GGTTCCGCTT CTGCGGATCC CAAGGCCCGC CTGCACTCCG GGGCGGGCCG GATCGTCTCG
CTCCCCATGC GCCCTCTTTC GATGGCGGAA CGCGGGTTGG CGACCCCCAC CGTCTCCCTC
GCCGAACTCC TTACCGGCTC CCGGCCCGCA ATCGGCGGTT CCAGCAGCCT GACACTGTCC
AACTACACCG ACGAGATCCT CGCGTCCGGG TTCCCAGGGA TCCGCGACCT CCCCGAGCTC
GCACGTGAGA CGCAACTGGA CTCCCACCTT GCGCGAATCG TTCAGCGCGA CTTGCCCGAA
GCCGGCGTGA TGGTCCGCAA GCCGCGCGCT CTGACGGCTT GGCTTGCCGC GTACGGCGCC
GCGACGGCAA CGACCACCAC GTACACGAGC ATCCTCGACG CGGCGACAGC GGACGAGGAA
GTGAAGGCCT CCCGGGCGAC GCTCGACGCC TACCGGGAGC ACCTCACCAG GCTCTTCATC
CTCGACCCCG TGCCCGCGTG GACGCCCGCG TTCAACCCTC TCAAGCGGCT CACCAAGTCC
GACAAGCACC ACCTCGTCGA CCCGGCCCTC GCCGCGCACC TCGTGGGAGT CGGCAAGCGT
GGGCTGCTGC ACGGAGACGG GCAGCGCGTC AACGGCGCGA CAGGCACCTG GTTGGGCGCG
CTCTTCGAGT CTCTCGCCGC GCAATCGGTC CGCGTCTACG CCGATGCGGC ACGTGCCCAG
GTCGGCCACC TACGCACGGA GGAAGACCAC CGCGAGATCG ACCTCATCGT CGAAGGCCGT
GACCGCTCCG TCGTGGCCAT CGAGATCAAG CTCGCCGCCA CGATCACTGC CAAGGACGTC
CGCCACCTCA ACTGGCTCGA CGACACGCTC GGCGACCGCC TCGCCGACAA GGTCATCGTC
ACCACAGGCG AACGCGCCTA CCGCCGCCCC GATGGCGTCG CCGTCATCCC CCTCGCACTC
CTCGGACCCT GA
|
|---|
| Protein sequence | MGYRRRTIDD ALDGLFPHLA AIAIEGAKGV GKTATAAQRV TTVLDLSRGP LQETIAADPD
QITAESPPVL IDEWQLVAPV WDAVKRAVDR DSAGAQFLLA GSASADPKAR LHSGAGRIVS
LPMRPLSMAE RGLATPTVSL AELLTGSRPA IGGSSSLTLS NYTDEILASG FPGIRDLPEL
ARETQLDSHL ARIVQRDLPE AGVMVRKPRA LTAWLAAYGA ATATTTTYTS ILDAATADEE
VKASRATLDA YREHLTRLFI LDPVPAWTPA FNPLKRLTKS DKHHLVDPAL AAHLVGVGKR
GLLHGDGQRV NGATGTWLGA LFESLAAQSV RVYADAARAQ VGHLRTEEDH REIDLIVEGR
DRSVVAIEIK LAATITAKDV RHLNWLDDTL GDRLADKVIV TTGERAYRRP DGVAVIPLAL
LGP
|
|---|
| |