Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2041 |
Symbol | |
ID | 8649571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2199489 |
End bp | 2202272 |
Gene Length | 2784 bp |
Protein Length | 927 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003326618 |
Protein GI | 269956829 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.111867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGTCCC CCGGGCAGCG CGCCGGCGCA CTGCTGCCTA TCGTGGAGCC CGTGCACGGC ACCGGTGGCC TGCTGGGCCG CGAGGACGAA CGGACGCGGC TCGCCGAGGT GATCGGCGCG GCGCGGAACG GGCACGGCAG CGCCCTGGTG GTGGTGGGAG AGCCGGGCAT CGGTAAGACG GCGTTGCTCC GCGACGCCGC TCAGCTCACC CAGCTCCGAG CGGTTCGGCT GGACGGGTAC GAGTCCGAGT CGGCGATGCC CTACGCCGCG ATCGAGCGGC TCACCGGTCT GCTGCGCGGG CACCTCGCGG ACATCCCCGA CCGCCAGCGG CAGACGTTGG ACATCGCGTC CGGCGCTGTG GACGGACCGG CGCCGGACCG CTTCCTCGTC GGACTGGGCG TCCTCAGCCT CCTTGCCGCG GCCGGTACGG GCCAGGCTCT GCTCTGCACC GTCGACGACG CCCACCTCTT GGACCCGGAG AGCCTGGCGG TCCTCGCGTT CGTCGCGCGG CGGCTCGGCG CCGAACATGT CGCCGTCGTC CTCGCGGGGC GGGACGAGGC AGACCTGGTC GCGACCTTGG CCGGCGTCCC CGTCCTCGAG CTGGCAGGTC TGGCTCCTGA GCCCGCGGTG GCTCTCCTGA ACCTCTCGAC GAACGAACCC TTCAGTCCGA CCGCCGCCAC AGCGATCGTC CGGGCGACCG GGGGCAACCC CTTGGCGCTG GTCGACCTGG CCGTCGACCC GCTGCTCCGC GAGCTCACCG ACCTTGGCCT GGGACCGGAC CCGGTGCCCA TCGGCAGACA CCTCGAGGCG CACTACCTGC GCCGCGTCAT GCAGCTGCCC GGCGAGTCGC AACGGTGGCT GCTGCTCGCA GCGGCGGACT CCACCGGCAA CCCCGAGCTG TTGGAGGACG CCGGCGCGCG GCTCGCGCTC GACCCCGCGC GTGGCGACGA CGCCGAGGCC GCTGGCCTCG TTCGCCTGGA ACCCATGGTC CGGTTCCGGC ACCCGCTCGT CCGCTCGGCC GTGTACTCCT CGGCGTCTCT CGGGGAGCGG CGTCGGGCGC ATGGTGCGCT GGCGGTGGCG GCGGGCAAGC TCGGCCTCGT CGAGGCGGAG GCGTGGCACG CCTCCCGGGC CGTCACGGGC ACCGATGCTG AGGTCGCCGA GCGCCTCGTC CACGCGGCTG ATCTCGCCGC CCGACGCGGC GGCTCGGCGT CGCGCGCGAG CATCCTGGCC CGGGCCGCCC GGCTCACGCC GGCCGGGGCG CTGCACGACG AGCGACAGGT CGAGGCGGCG GAGGCCGCGC TGGAGGCGGG TGCTGCCGAC GTCGCCGGAC GGCTGCTCGC CGATGTCCGT GACGCCGATC TCGATCGTGT GGTGCGCGGA CGCGCGATCT TGGTCCGCAG TGCCGTAGCG CTCTTCGTCG CGGACCCTGC GGGGGTGCGT GCCGCGACGA CGGAGCAACT TCGCGCCGCC GACGCTTTCC GCGGGCACGA CACCGCCCGG GAGCAGCAGG CTCTGCTGGA GGCGTTCGAG CGGTGCCTGT CAGCCGAGCG TCTCGTCGAC GGGACCACGC TCGACTCGCT CGGACGCCGG ATGGCGCGTG GCGCTTCGGG GGACGATCCC GCGTCGAGGA TCTTGCGCGG GATCGCGGCC ATGGTCCTGG AGTCCTACGC GGCGGCACTG GGGCCTGCGC GGGACGCCTT CGCCGCCCTG CTCGGCCTGC CCGACGAGAT TCTGCGGCGC TCGGGCACGC TCATCGCGTC GATCGGCGCG TTCCTGTGGG ACGACGTCGG CCGGGCCGCC GGGCTCACGC GTGCCCGGCG CGCCGCGCAG GAGATGGGCG ACCTCCAGCG GCTCGACACC CTGCTCTGGG TGAGCGCGCT CGCGGAGCTC TGCGGGGGCA GCGTCGAGCG GGCGCGTGGC TTCGACGACG CCGTCCGCGA GGTGCGCAAG GCGATGGGGT ACGACGGCGA GAACGTCGTC AACGGCGCGG TCCTCAGCTG GACAGGTGCG TCCTTCGAAC TGGTCGCCGC GATCGCCGAC GGTGCGAACG CGACCGGTTT CGGGGGTGTG GGCTCGTCCA CGACGTGCGC GCTGGCGGTC CGCGACCTCG CGGCGCGCGA CTACGGCGCC GCGCGTGAGC GGTTGCACCC GATCGTCGTT CTCGATCCGT TCCTGCAGAC CACGCCGCTG TTCCTCGCGG ACCACGCGGA GGCGGCCACC CGGTCGGGAC ACGTCGAGGA GGCGAAGCGC TCGGCCCGGA CCCTCGCGGA GATGGCAGGC GTCAACGGCT CCGCCTGGTG CCGGGGTGTT GCCGAGCGGG CCCTTGCGCT GACCGGCGAC GGCGAGGTCG AGCAGCACTA CCGCGCGTCC GTCGAGGCGC TCGCCTCCAC CGGTGCGGTC GTCGAGCTCG CGCGCTCCCA CCTGGTGTAC GGGGAGTGGC TCCGGCGCGC CCGGCGCCGG CGTGAGGCCG TCGCCCAGCT CCGTCTGGCC CGCGACCACT TCGATCGCAG CGGCGCCGCG GTCTTCCTTC CCCGCACCCT CGCCGAGCTC GAGGCTGCGG GAGTCACGGA GGATGTCGCG GCGCACGGCG ACGCGCTCGA CCTCACGACC CAGGAACGCA CCGTCGCCCG GTTGGCGGCT GCCGGACGGA CCAACGCGGA GATCGGCGCC AACCTGTTCA TCAGCCCCAA CACCGTCGAC TACCACCTGC GCAAGGTGTT CCAGAAGCTC GGCATCACGT CGCGCCGACA GCTCGCGGAG CACCTCGGCG GCGAGGGTCG CTGA
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Protein sequence | MRSPGQRAGA LLPIVEPVHG TGGLLGREDE RTRLAEVIGA ARNGHGSALV VVGEPGIGKT ALLRDAAQLT QLRAVRLDGY ESESAMPYAA IERLTGLLRG HLADIPDRQR QTLDIASGAV DGPAPDRFLV GLGVLSLLAA AGTGQALLCT VDDAHLLDPE SLAVLAFVAR RLGAEHVAVV LAGRDEADLV ATLAGVPVLE LAGLAPEPAV ALLNLSTNEP FSPTAATAIV RATGGNPLAL VDLAVDPLLR ELTDLGLGPD PVPIGRHLEA HYLRRVMQLP GESQRWLLLA AADSTGNPEL LEDAGARLAL DPARGDDAEA AGLVRLEPMV RFRHPLVRSA VYSSASLGER RRAHGALAVA AGKLGLVEAE AWHASRAVTG TDAEVAERLV HAADLAARRG GSASRASILA RAARLTPAGA LHDERQVEAA EAALEAGAAD VAGRLLADVR DADLDRVVRG RAILVRSAVA LFVADPAGVR AATTEQLRAA DAFRGHDTAR EQQALLEAFE RCLSAERLVD GTTLDSLGRR MARGASGDDP ASRILRGIAA MVLESYAAAL GPARDAFAAL LGLPDEILRR SGTLIASIGA FLWDDVGRAA GLTRARRAAQ EMGDLQRLDT LLWVSALAEL CGGSVERARG FDDAVREVRK AMGYDGENVV NGAVLSWTGA SFELVAAIAD GANATGFGGV GSSTTCALAV RDLAARDYGA ARERLHPIVV LDPFLQTTPL FLADHAEAAT RSGHVEEAKR SARTLAEMAG VNGSAWCRGV AERALALTGD GEVEQHYRAS VEALASTGAV VELARSHLVY GEWLRRARRR REAVAQLRLA RDHFDRSGAA VFLPRTLAEL EAAGVTEDVA AHGDALDLTT QERTVARLAA AGRTNAEIGA NLFISPNTVD YHLRKVFQKL GITSRRQLAE HLGGEGR
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