Gene Xcel_1955 details

Gene Information

• Locus tag: Xcel_1955
• ID: 8649485
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 2113848
• End bp: 2114567
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 69%
• Product: Peptidoglycan-binding LysM
• Protein accession: YP_003326532
• Protein GI: 269956743

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGCGG TGGCCAAGAC GGAGCCCGCC CGGTTCAAGG TCCGGCGCAA GAGGGGCACG 
ACCGACGAGC TCAAGGTGCA GTTCAACCCG AGCTCGCTGG TGCTCGACAA GTCGCCGAAG 
ATCGCCGAGC TCGCGATCCC CGGGCTGGAC GCCCCGGTGC GCCAGTTCGT GCGGGGCCTG 
AGCGAGAAGC TCACCGTCCA GCTCTTCTTC GACTCGACCG AGAAGGGCAC GGGCGCCAAG 
GCCGAGTCGG TGACCCGAGA GACGGACAAG TTCTACGGGC TGGTCAAGAT CGACCCCGAG 
ACGCACGCGT CGGCGGTGTG CACGTTCGCG TGGAACGAGA AGTTCCCCGG GGCCGAGCTC 
CCTGCGATGT ACGAGAACCA GCGGCGCACC GAGTTCACCG GGCTCGTCAC GAACGTCAAG 
CAGACCTTCT CGCTGTTCAA CCCCGACGGC GTCCCGCTCC GTGCGGTGCT CGACGTCACG 
ATGGAGGAGT ACCGGCCCCT GGAGCAGCAG CTCAAGGAGC TCGGGCTCAA GTCCTCCGAC 
CACACGCGTG ACCACGTGGT CGCCGACGGC GAGAACCTGC CGCTGCTCGC CTGGCGGTAC 
CTGGACGAGC CGGCGCGGTG GCGCCACCTG GCGGACGCCA ACGGGCTGGA CGACCCGCGG 
CGCCTCGTCG TCGGTTCATC GGTGCGCGTG CCGCCGACGT CCGGGGCGGT GACGCGATGA 

 

Protein sequence

MSAVAKTEPA RFKVRRKRGT TDELKVQFNP SSLVLDKSPK IAELAIPGLD APVRQFVRGL 
SEKLTVQLFF DSTEKGTGAK AESVTRETDK FYGLVKIDPE THASAVCTFA WNEKFPGAEL 
PAMYENQRRT EFTGLVTNVK QTFSLFNPDG VPLRAVLDVT MEEYRPLEQQ LKELGLKSSD 
HTRDHVVADG ENLPLLAWRY LDEPARWRHL ADANGLDDPR RLVVGSSVRV PPTSGAVTR