| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1914 |
|---|
| Symbol | |
|---|
| ID | 8649444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2063271 |
|---|
| End bp | 2064614 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | deoxyribonuclease/rho motif-related TRAM |
|---|
| Protein accession | YP_003326491 |
|---|
| Protein GI | 269956702 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCAGC CTCGTGCCTC TCGGCCCAGC CGTCCCTCCC GTCCCGTCCA GCGCCGCCCC
CGGCCTCGTC CCGTCGACTC TGACGCCGGG ACGGAGCTCG AGCTCGTCGT CGGGCCGGTG
GCGCACGGCG GTCACGCCGT CGCACGGCAC GAGGGACGCG TCGTGTTCGT GCGGCATGCC
CTGCCGGGGG AGCGCGTCCG CGCCGTCGTG ACCGAGGGCG GGCCCAAGTT CTGGCGGGCC
GACGCGCTCG AGGTGCTCGC CGACCCGTCC CCCGACCGGG TGCCCTCCGC CTGGCCCGAG
GCCGGTCCCG ACGGCGTCGG TGGCGGCGAG CTCGCCTTCG TCTCGCTCGA CGGGCAGCGC
CGCTGGAAGG CTGCCGTCGT CCGCGAACAG CTGCAGCGGC TCGCGAAGAT CGACCGCGAG
GTGGTCGTCG AGGCTGCGCC CGGCGACGAC GCCCGCGGTG GCCTGCACTA CCGGACCAGG
GTCGACCTCG TCGCCGACGG CGAGGGCCGG GCGGGCATGC GCAAGTTCCG CTCCCACGAC
GTCGTCCCGC TCGACGCGAT GCCGCTCGGG ACCGCCGACG TCGCGGCGCT CGCCGACGCC
GAGGGCGTGT TCACGCGCCG CTGGACGCCG GGGGCGCGGC TCGAGCTGGT GGCACCGGCC
GACGGCTCGG AACCGGTGCT GCTCGTCGAC GGCGAGCTGT GGCGCGGCGG GCGCGTGGAC
CGGCGACCCA ACGCACGCCG CGCGGTCGGG GAGTCCGTGA CGCCGCTGCG CGCCGCGGGC
CCGGCCGAGA CGTTCCGGTA CCGCGTCGCC GCCGACGGCT TCTGGCAGAA CCACCGCGAG
GCGCCCGCCG TGCTCAGCGG GGCGGTGCTC GACGCCGTCG GGGACGCCTC CGGTGCGACC
GTCATCGACC TGTACTCGGG CGCGGGCCTG TTCACCCTGC CCCTCGCCGG GGTCGTCGGC
ACCGGTGGCC GCGTCGTCGC CGTCGAGGGG GACACCCGCG CGGTCAAGGA CGCCCGGCGC
AACGCCCATC ACCTGCCCCA GGTCGAGCTG CACCTCGGAG CGGTCGACCG CGTCCTTGCC
GACGGGGACA GCGGGGGAGC CGGCGTCGGT GCGGCCGACG TCGTCGTCCT CGACCCGCCG
CGCGCCGGCG CCGGCCGCAG CGTCGTCGAG GCGATCGTCC AGCGCGGCCC GGCCCGCGTC
GTCTACGTCG CCTGCGATCC CGCCGCCCTG GCGCGCGACG TCGCCTACTT CGCGGGTCAC
GGGTACGAGC TGGCCGACCT GCGCGCGTTC GACCTCTTCC CGCACACCCA CCACGTCGAG
GCGGTCGCCG TCCTCACCCG CTGA
|
|---|
| Protein sequence | MPQPRASRPS RPSRPVQRRP RPRPVDSDAG TELELVVGPV AHGGHAVARH EGRVVFVRHA
LPGERVRAVV TEGGPKFWRA DALEVLADPS PDRVPSAWPE AGPDGVGGGE LAFVSLDGQR
RWKAAVVREQ LQRLAKIDRE VVVEAAPGDD ARGGLHYRTR VDLVADGEGR AGMRKFRSHD
VVPLDAMPLG TADVAALADA EGVFTRRWTP GARLELVAPA DGSEPVLLVD GELWRGGRVD
RRPNARRAVG ESVTPLRAAG PAETFRYRVA ADGFWQNHRE APAVLSGAVL DAVGDASGAT
VIDLYSGAGL FTLPLAGVVG TGGRVVAVEG DTRAVKDARR NAHHLPQVEL HLGAVDRVLA
DGDSGGAGVG AADVVVLDPP RAGAGRSVVE AIVQRGPARV VYVACDPAAL ARDVAYFAGH
GYELADLRAF DLFPHTHHVE AVAVLTR
|
|---|
| |