Gene Xcel_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1725 
Symbol 
ID8649249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand+ 
Start bp1869149 
End bp1869811 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content71% 
IMG OID 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003326306 
Protein GI269956517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0183458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGC TGATCAACCC GAGCATCCTG TCCGCCGACT TCGCCAACCT CGAGCGGGAC 
CTGCACGCCA TCAAGTCCGC CGACTACGCG CACGTCGACG TGATGGACAA CCACTTCGTC 
CCCAACCTCA CGCTCGGACT GCCCGTGTTC GACCGGCTCG CCGCGATCTC CCCGGTACCC 
CTCGACGCGC ACCTCATGAT CGACGACCCC GACCGGTGGG CCCCCCAGTT CGCCGAAGCC 
GGCGCCGCCT CCGTGACCTT CCACGCCGAA GCCGCACAAG CCCCCGTGCG CCTCGCCCGC 
GAGCTACGCC GCCTCGGCGC CCGCGCCGGA GTCGCACTAC GCCCCGCCAC CCCCGTCGAA 
CCATTCCTCG ACCTGCTCGC CGAGATCGAC ATGATCCTCG TCATGACCGT CGAACCCGGA 
TTCGGCGGCC AGACCTTCAT CGACGGCACC CTGCCCAAGA TCCGCCGCGC CCGGAAAGCC 
ATCAGCGAGT CCGGCCTCGA CGTCTGGGTG CAGGTCGACG GCGGCGTCTC CCGCACCACC 
ATCGAACGAG CCGCCGACGC CGGCGCCAAC GTCTTCGTCG CCGGGTCCGC CGTGTACGGC 
GCCGACGACA TCCCCGCCGA GATCGACGCC CTGCGGGCGC TCGCGGACGC CCACACCCAC 
TGA
 
Protein sequence
MAALINPSIL SADFANLERD LHAIKSADYA HVDVMDNHFV PNLTLGLPVF DRLAAISPVP 
LDAHLMIDDP DRWAPQFAEA GAASVTFHAE AAQAPVRLAR ELRRLGARAG VALRPATPVE 
PFLDLLAEID MILVMTVEPG FGGQTFIDGT LPKIRRARKA ISESGLDVWV QVDGGVSRTT 
IERAADAGAN VFVAGSAVYG ADDIPAEIDA LRALADAHTH