Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1693 |
Symbol | |
ID | 8649217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1835150 |
End bp | 1836007 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Shikimate dehydrogenase substrate binding domain protein |
Protein accession | YP_003326274 |
Protein GI | 269956485 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCGTCA CTCCCCGCCG TGCCGCCGTG CTCGGCCACC CCGTCGCGCA CTCGCTCTCA CCCGTGCTGC ACACCGCCGC CTACGAGGCC CTGGGCCTCG ACGGCTGGCA GTACTCCGCG ATCGACACGA CGTCGGAGTC CCTCCAGGAC CGCGTCGACG ACCTCGACCT GACCTGGGCG GGCTTGAGCC TGACGATGCC GCTCAAGCAG ACGGTCATCC CGATGCTCGC CGAGATCGAC CCGGTCGCGA TCGGGACGGG GGCGGTCAAC ACCGTCGTCG TCAGGCCGTC CTCGTGCGGC GTCACGCTCG CCGGGTACAA CACCGACGTC TACGGCCTGG TCACCGCGCT GGGCGAAGGG CTGCGCGGGC GCGACGTCGG CAGCGCCGTC GTGCTGGGCG CCGGGGCGAC GGCGGCGTCC GCCGTCGCTG CCCTGGCCGA GCTCGGCTGC GCCACCCCGC GCGTGCTGGC CCGGTCGCTC GGCCGCACCG TCGAGCTGCG GGAGGCTGCC ACGCGCCTCG GGGTGGCGCC GACGTTCGAG GTGCTCGACA CCGTCACCGC CGTCGAGCCC TTGGAGCATG CCGACGTCGT CGTCTCGACC CTGCCCGCGC ACGCCGCGGA CGGGATCGCG GCCGCGGCCC GCGACGCCGG CCGGTCCCTG CCGGGCGTGC TGCTCGATGT CGTCTACGAC CCACGCCCCA CCGCCCTGGC CCGTGCCTGG GAGGACCTGG GCGGCGTCGT CGTCGGCGGG GAGCGCATGC TCCTGCACCA GGCCGCGCGG CAGGTGAACC TCATGACGGG GCGCCTCGCC CCGGTCGCGG CGATGGACGC CGCGCTCGCG GCCGCCCTGG ATCGCTGA
|
Protein sequence | MPVTPRRAAV LGHPVAHSLS PVLHTAAYEA LGLDGWQYSA IDTTSESLQD RVDDLDLTWA GLSLTMPLKQ TVIPMLAEID PVAIGTGAVN TVVVRPSSCG VTLAGYNTDV YGLVTALGEG LRGRDVGSAV VLGAGATAAS AVAALAELGC ATPRVLARSL GRTVELREAA TRLGVAPTFE VLDTVTAVEP LEHADVVVST LPAHAADGIA AAARDAGRSL PGVLLDVVYD PRPTALARAW EDLGGVVVGG ERMLLHQAAR QVNLMTGRLA PVAAMDAALA AALDR
|
| |