| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1645 |
|---|
| Symbol | |
|---|
| ID | 8649169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1784299 |
|---|
| End bp | 1784694 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | aspartate 1-decarboxylase |
|---|
| Protein accession | YP_003326226 |
|---|
| Protein GI | 269956437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.204596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA CCATGCTGAA GTCCAAGATC CACCGCGCCA CGATCACCGG CAGCGACCTG
CACTACGTCG GTTCGATCAC CATCGACGCC GACCTGCTCG ACGCCGCCGA CATCCTCGAG
CACGAGCAGG TCCACGTCGT CGACGTCGAC AACGGCGCGC GGTTCGAGAC GTACACGATC
GCGGGCGAGC GCGGCTCGGG GACCATCCAG GTCAACGGGG CGGCCGCCCG CCTGGTGCAC
AGCGGGGACA CGATCATCGT CATCTCGTAC GCGCAGTACG ACCGCGCCGA GCTCGCCACG
TACGAGCCGC GAGTCGTGCA CGTGGAGCGC GGCACCAACG CCGTGATCCA GGTCGACGAC
GCCGTCGCCA CGCTGCTCGG GGAGCCGCTC GCATGA
|
|---|
| Protein sequence | MQRTMLKSKI HRATITGSDL HYVGSITIDA DLLDAADILE HEQVHVVDVD NGARFETYTI
AGERGSGTIQ VNGAAARLVH SGDTIIVISY AQYDRAELAT YEPRVVHVER GTNAVIQVDD
AVATLLGEPL A
|
|---|
| |