| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1268 |
|---|
| Symbol | |
|---|
| ID | 8648786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1378896 |
|---|
| End bp | 1379858 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Spermidine synthase-like protein |
|---|
| Protein accession | YP_003325857 |
|---|
| Protein GI | 269956068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCC GCAGCGTGCG CTCCTCGAAG CGATCCCCAT CCTCCGCCGA GCCACCGACA
CTCCCCCTCG GGCCCGTCCC CATCGACACC GGCACGGCCG AGGTCGTCCC CGACCGCGAC
CACGCCGGCC GGGTGACGCT GCAGGTCAAC GGCGTGCCGA GCTCGTACCT CGACCTTGAC
GACCCCGGGT TCCTCGCGTT CGAGTACATG CAGTACATGG ACGCCGTCGT CGCCGCGACC
CTGCCGGGGC CGCTCCGCGC GCTCCACCTC GGTGCGGCCG GCTGCGCGCT CGCACGGTCC
TGGGACGCCG CCCGGCCGGG GTCGCGGCAG CTCGCGATCG ACGTCGACGC CCGGCTCGTC
CAGCTCGTGC GCGAGTGGTT CGCCCTGCCC CGCGCCCCGC GCCTGCGCCT GCGGGCCGAC
GACGCGGCGG CCGCCGTCGC CACCGCCGCC CCGGCGTCGT ACGACGTCGT CGTGCGGGAC
GTCTTCGCCG GGGACGCCAC CCCCGGGCAC CTCGTGACGC AGCAGGTCGC CCGGCAGGTG
GCCGCGGCGC TGCGGCCCGG CGGGCTGTAC CTCGTCAACT GCGCCGACCG CCCGCCCCTG
GAGCGGGCGC GCCGCGAGCT CGCGACGCTG GCCGCGGCGT TCGGCCCCGA CGCCGTCGCC
GACGGCCGGC TCGTGCTCAT CGCCGAGCCG GGCATCCTCA AGGGCCGCCG CTACGGCAAC
CTCGTGCTGG CCGCGGTCCG TCCGCTCCCC GCGACCGACG ACACCGACGA CACCGACGAC
GCCGAAGTCG ACCGGGGCGG CGACGACGGC GGCGCTGTCG AGACCACCAG CGCCGACCAT
GACGCGTTGC CCGACCTGCG CTCGGCGGCC CTGGCCCGCG CCCTGCGCGC GCTGCCCGCG
CCGGCCCACA TCCTCACCGA CGACGAGCTG GCACGCTTCG CGGGCACGGC ACGCCCGTTC
TGA
|
|---|
| Protein sequence | MARRSVRSSK RSPSSAEPPT LPLGPVPIDT GTAEVVPDRD HAGRVTLQVN GVPSSYLDLD
DPGFLAFEYM QYMDAVVAAT LPGPLRALHL GAAGCALARS WDAARPGSRQ LAIDVDARLV
QLVREWFALP RAPRLRLRAD DAAAAVATAA PASYDVVVRD VFAGDATPGH LVTQQVARQV
AAALRPGGLY LVNCADRPPL ERARRELATL AAAFGPDAVA DGRLVLIAEP GILKGRRYGN
LVLAAVRPLP ATDDTDDTDD AEVDRGGDDG GAVETTSADH DALPDLRSAA LARALRALPA
PAHILTDDEL ARFAGTARPF
|
|---|
| |