| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1185 |
|---|
| Symbol | |
|---|
| ID | 8648703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1279610 |
|---|
| End bp | 1280779 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | radical SAM enzyme, Cfr family |
|---|
| Protein accession | YP_003325774 |
|---|
| Protein GI | 269955985 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACCA CCGACGTCCC GGCCCCTCAG GTCCGCCCCG GTCACGAGAC CACGCCCGTC
GCCCTGCAGA TGGCGCCGCG CCGCGCCGTC AAGGCGCCCC GCCACTTCGC CGACCTCACG
CACGCGGAGC GGGTTGCCGC CGTCGCGGAG CTGGGGCACC AGGGCTTCCG GGCGAAGCAG
CTCGCCACGC ACTACTTCGC GCACTACACC ACCGACCCCG CAGACTGGAC CGACATCCCC
GCGGCGGCCC GCGAGGGCAT GGCTGCCGCG CTGTTCCCGC CGCTCCTGAC GGCCCGCCGA
ACGCTCGAGG CGGACAAGGG GACGACGGTC AAGACGCTGT GGGGCCTGCA CGACGGCACC
CGCATCGAGT CGGTCCTGAT GCGCTACCCG CGCCGCTCCA CCCTGTGCAT CTCCAGCCAG
GTCGGGTGCG GCATGGCGTG CCCGTTCTGC GCGACCGGAC AGCTCGGGTT CACCCGCAAC
CTGTCGGCGG CGGAGATGCT GGAGCAGGTG CGGCTCGCCA TGCGCTCGCT CGCGCTCGGC
GAGATCCCGG GTGGTCCCAC CCGCCTGAAC AACCTGGTCT TCATGGGCGA GGGCGAGGGC
CTGATCAACT ACCGGGCGAT CATGACGTGC ATCCGCACGC TCGTCGCGGA CGCGCCCGAG
GGCTTCGGCA TGAGCGCGCG CAACATCACC GTCTCGACGG TGGGTCTGGT CCCGGGCATG
AAGAAGCTCG CGGCCGAAGG GCTGCCGCTC ACGCTGGCGC TCAGCCTGCA TGCGCCCGAC
GACGACCTGC GCAGCGAGCT CGTGCCCATC AACACGCGGT TCAGCGTCGA CGAGGCGCTG
GACGCGGCCC GCGCGTACTT CGAGGCGACG GGACGCCGGG TGTCGATCGA GTACGCCCTG
ATCAAGGACA TGAACGACCA CGCCTGGCGC GCCGACCTGC TGGGCACCAA GCTCAACGCC
CGCGGCAAGG GGTGGGTGCA CGTGAACCCG ATCCCGCTCA ACCCGACTCC CGGATCGATC
TGGACGGCGT CGGAGCGTGC CGTCGAGGAC GAGTTCGTCG CTAGGCTGCG GGGGCACGGC
ATCCCGACGA CGGTGCGGGA CACCCGTGGA TCGGACATCG ACGGCGCCTG CGGGCAGCTG
GCCGCCGAGG AGGAAGAGGG AGACGCATGA
|
|---|
| Protein sequence | MPTTDVPAPQ VRPGHETTPV ALQMAPRRAV KAPRHFADLT HAERVAAVAE LGHQGFRAKQ
LATHYFAHYT TDPADWTDIP AAAREGMAAA LFPPLLTARR TLEADKGTTV KTLWGLHDGT
RIESVLMRYP RRSTLCISSQ VGCGMACPFC ATGQLGFTRN LSAAEMLEQV RLAMRSLALG
EIPGGPTRLN NLVFMGEGEG LINYRAIMTC IRTLVADAPE GFGMSARNIT VSTVGLVPGM
KKLAAEGLPL TLALSLHAPD DDLRSELVPI NTRFSVDEAL DAARAYFEAT GRRVSIEYAL
IKDMNDHAWR ADLLGTKLNA RGKGWVHVNP IPLNPTPGSI WTASERAVED EFVARLRGHG
IPTTVRDTRG SDIDGACGQL AAEEEEGDA
|
|---|
| |