| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1051 |
|---|
| Symbol | |
|---|
| ID | 8648562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1127497 |
|---|
| End bp | 1129383 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_003325640 |
|---|
| Protein GI | 269955851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG CACAGCCACT GCCGGATCCC GACCCCTTCG ATCTGTTCGC CGCGGCGGCA
GAGCCGGAGC CTCGCACCGA GCTCCGGCCG GTCGGGGCGC GCCCGACCCC GCAGACCCCG
TCGACGGCGG CCGCGTCCCA GCTCAGCCCG GCGTTCCCGC GCCGCGCACC CTGGGGGACG
GCGTCGAACC TCCGCGCCTG GCAGGCCGAG GCCCTGGAGC TGTACCGGGC CAAGGAGCCG
CGCGACTTCC TCGCCGTCGC CACGCCGGGC GCCGGCAAGA CGACGTTCGC GCTGCGCGTG
GCCACCGAGC TCATCGAGCG TGGCGTCGTG CGCCGGGTGA CCGTCGTCGC GCCCACCGAG
CACCTCAAGC ACCAGTGGGC CGACGCGGCC TCGCGCGTGG GCATCCGCAT CGACCCGTCG
TTCAAGAACG CCCAGGGCCG CCACGGTGCC CACTACGACG GCGTCGCGCT GACGTACGCG
CAGGTGGCGG CCAACCCGGC GCTGCACCGG GCCCGCACCG AGGCCGCGCG CACGCTGGTG
ATCCTCGACG AGGTGCACCA TGGCGGCGAC GCCCTCTCGT GGGGTGACGC CGTGCGCGAG
GCGTTCGAGG ACGCCACCCG GCGGCTCGCG CTGACGGGCA CACCGTTCCG CTCGGACACC
GCGCCGATCC CGTTCGTCAC CTACGAGGCC GACGGCGCGG GCATCCGCCG CTCGAAGGCG
GACTACACAT ACGGCTACGG CGACGCGCTG CGCGACAAGG TCGTGCGACC CGTGCTCTTC
ATGACGTACT CGGGCAACAT GCGCTGGCGC ACCAAGGCGG GTGACGAGGT CTCGGCCCGC
CTCGGCGAGG CGATGACCAA GGACATGACC GGCCAGGCGT GGCGCACCGC CCTGGACCCG
AACGGCGAGT GGATCCCGTC GGTGCTGGCC GCGGCGGACA AGCGCCTCTC CGAGGTGCGC
CGGTCCGTGC CCGACGCCGG TGCGCTCGTC ATCGCCACCG ACCAGACGGC CGCACGCGCG
TACGCGGGGC ACCTGGCCCG GATCACGGGC GCGTCGCCGA CGGTCGTCCT GTCCGACGAC
GACGGCGCCT CGGCCCGCAT CGACGAGTTC TCGAAGAGCG ACTCGCGCTG GATGGTCGCG
GTGCGCATGG TCTCCGAGGG CGTGGACGTG CCGCGCCTCG CCGTCGGCGT GTACGCGACC
TCGACGTCGA CGCCCCTGTT CTTCGCCCAG GCGGTAGGTC GCTTCGTGCG GGCGCGCTCG
CGCGGGGAGA CGGCGTCGGT GTTCCTGCCG TCGGTGGCCC CGCTGCTGGA CCTCGCGGGG
GGCATGGAGA TGGAGCGGGA TCACGCGCTC GACCGGCCCG CGACCGCCGA GGAGCAGGGG
ATCGACTACG ACCCCGAGGC CGCCGAGCTC GCCGCCGCGA ACCGCGAGGA GAAGGCGTCG
GGCGAGCTGC TCGGGTCGTT CGAGGCCATG GAGTCGCAGG CGTCGTTCGA GGGCGTGCTG
TTCGACGGCG GCCAGTTCGG CACCGGGGCG GAGGTCGGGT CGGCGGAGGA GCTCGACTTC
CTCGGCCTGC CGGGTCTGCT CGAGGCCGAC CAGGTGGCCA CGCTGCTGCG GCAGCGGCAG
GCCGACCAGC TCCGCGGGCG GGCAGGCGCC CCGACGGAGC GCGAGCTGAC CGTGCAGGAG
GCCGAGCAGG AGCACCGCCG CGCCACGGCG CTGCGCAAGG AGCTCTCGAA GCTGGTCTCG
GCGTGGTCGC GCAAGTCGGG CCGCCCGCAC GGAGCGGTGC ACACCGAGCT GCGCCGCCGC
TGCGGCGGCC CTGAGGTTCC GCTCGCGACG AGCGCGCAGC TCGACGCCCG GATCGCGATG
GTCCGCTCCT GGTTCGTCGC GGGCTGA
|
|---|
| Protein sequence | MSAAQPLPDP DPFDLFAAAA EPEPRTELRP VGARPTPQTP STAAASQLSP AFPRRAPWGT
ASNLRAWQAE ALELYRAKEP RDFLAVATPG AGKTTFALRV ATELIERGVV RRVTVVAPTE
HLKHQWADAA SRVGIRIDPS FKNAQGRHGA HYDGVALTYA QVAANPALHR ARTEAARTLV
ILDEVHHGGD ALSWGDAVRE AFEDATRRLA LTGTPFRSDT APIPFVTYEA DGAGIRRSKA
DYTYGYGDAL RDKVVRPVLF MTYSGNMRWR TKAGDEVSAR LGEAMTKDMT GQAWRTALDP
NGEWIPSVLA AADKRLSEVR RSVPDAGALV IATDQTAARA YAGHLARITG ASPTVVLSDD
DGASARIDEF SKSDSRWMVA VRMVSEGVDV PRLAVGVYAT STSTPLFFAQ AVGRFVRARS
RGETASVFLP SVAPLLDLAG GMEMERDHAL DRPATAEEQG IDYDPEAAEL AAANREEKAS
GELLGSFEAM ESQASFEGVL FDGGQFGTGA EVGSAEELDF LGLPGLLEAD QVATLLRQRQ
ADQLRGRAGA PTERELTVQE AEQEHRRATA LRKELSKLVS AWSRKSGRPH GAVHTELRRR
CGGPEVPLAT SAQLDARIAM VRSWFVAG
|
|---|
| |