| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1039 |
|---|
| Symbol | |
|---|
| ID | 8648550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1115077 |
|---|
| End bp | 1116555 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003325628 |
|---|
| Protein GI | 269955839 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC CGCCGCAGAG CATCCGCCGC GGCCTCCCCC GCCGCCCCGG CGGCCCCCCA
TGGCCCGACG CCGCCGCGCC ACCATCGCCC GCACCCCCCG AGCTGTCAGA CGCACGCAAG
TCCCCGCACC TGCGACCGTC TGACACCCTG ACCCCCCACC CCGACGTGTC AGACGCACAC
AAGACCCGGG TCTTGCCACC GTCTGACAAC CACGGGAGCG GGGCTGCCCT GCGCCGCGGA
CTCCCACGCA CTCCCGGTGG GCAGCCGTGG CCGCCCGCCA CCGCGCCCCT CCCCGAGCTG
TCAGACGGTG GCAAGGCCCT GGACTCGCGA CCTTCTGACA CGCCGATGCC TCCACCCGCC
ATCGCGCCCG CCCGCCCGGA ACCGTCAGAC GCACGCGAGG CCAGGGCCTT GCCTGCGTCT
GACAACCGCG GGCGGGAGTC CGGGGTCGCG GCGGCTGACG ACCGCGGGCG GGAGTCCGAG
GTCGCGGCCG CTGACGACCG CGGGCGGGAG TCCGGGGTCG AGGCGGCTGA CGACCGCGCG
CGGGAGTCTG TGGTCGTCGC GGCGGCTGAG GGTGCCTCGC GGGGTCCTGG GCGCGGGCTC
GGCGGGTGGG TCAGGTTCGC GTGGTGGCGT GCGATCGGCG TCGTCGTCGG TGCGGGCGTC
ATCGTGCTGG CCGCGCGCGG CGTGACCACG CTGCCCGGCG TGCCCGCGTT CCTGGAGCGC
TACCCCGGCG CCTACGCGCT GCCCGACGGC GCCCCTGTGG GCTTCCCGGT GTGGCTGAAC
TGGGCGCACT ACCTCAACTT CTTCTTCCTG ACCCTCATCG TGCGCACGGG CCTGCAGGTG
CGGCGCGAGC AGAAACCGTC TGCCTACTGG ACGCCCGCGA AGGGCGGCAC GAAGGTCAGC
ATCCACCACT GGCTGCACAC GGCCGTCGAC GTGCTGTGGC TGGTCAACGG CCTCGCGTTC
GTGGTGCTGC TGTTCGCCAC GGGCCAGTGG ATGCGGATCG TCCCGACGTC GTGGGCGGTG
TTCCCCAACG CGGCGTCGGC GGGCCTGCAG TACCTGACGC TCGACTGGCC GACCGAGCAC
GGTTGGGTCG CCTACAACAG CCTCCAGCAG CTCATGTACT TCGTGGTGGT GTTCGTCGCC
GCTCCGCTGG CTGCGATCAC GGGGGTGCGG ATGAGCCGGT GGTGGCCACA GGACGCGCGG
CGGCTGAACC GGATCTACCC GGCGCCCCTG GCGCGCGCCA TCCACTTCCC CACGATGCTG
TTCTTCGTGC TGTTCGTGAT CGTGCACGTC TTCCTGGTGT TCACCACGGG GGCGCTGCGC
AACCTCAACC ACATGTTCGC GGCGTCGGAC GCGGTGGGCT GGGCCGGGTT CGCGTGGTTC
GCGGTGGGCT TCGGCCTCGC GGTGGCAGCG GTGGCGGCGG CGCGGCCGCT GGTCGTCACG
CCGATCGCGT CCCTGTTCGG CAAGGTCAGC AGCCGCTGA
|
|---|
| Protein sequence | MTAPPQSIRR GLPRRPGGPP WPDAAAPPSP APPELSDARK SPHLRPSDTL TPHPDVSDAH
KTRVLPPSDN HGSGAALRRG LPRTPGGQPW PPATAPLPEL SDGGKALDSR PSDTPMPPPA
IAPARPEPSD AREARALPAS DNRGRESGVA AADDRGRESE VAAADDRGRE SGVEAADDRA
RESVVVAAAE GASRGPGRGL GGWVRFAWWR AIGVVVGAGV IVLAARGVTT LPGVPAFLER
YPGAYALPDG APVGFPVWLN WAHYLNFFFL TLIVRTGLQV RREQKPSAYW TPAKGGTKVS
IHHWLHTAVD VLWLVNGLAF VVLLFATGQW MRIVPTSWAV FPNAASAGLQ YLTLDWPTEH
GWVAYNSLQQ LMYFVVVFVA APLAAITGVR MSRWWPQDAR RLNRIYPAPL ARAIHFPTML
FFVLFVIVHV FLVFTTGALR NLNHMFAASD AVGWAGFAWF AVGFGLAVAA VAAARPLVVT
PIASLFGKVS SR
|
|---|
| |