Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1032 |
Symbol | |
ID | 8648542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1106946 |
End bp | 1107803 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | type II secretion system protein |
Protein accession | YP_003325621 |
Protein GI | 269955832 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTCC TCGTCGGCCT GCTGCTCGGG CTGGGCCTCT TCTGCGTGTG GTGGTCGGCC TGGGCGCCGT CGGGACGCCC GCGGCGGACC TCGGCACGCA TCGCCCGCAC CCAGGACCTG CTGGTGCAGG CGGGCGCCGC CTCCGTCACC CCGGGCGCGC TGTACGGGGC GAGCGCGGCG CTCGCCGCCG TCGTGCTGCT CATGGTGCTG GCCACCACCC GCTCCCCCGC CATCGGGCTC TGCTTCGCCG CCATCGCCGC GGCGGCACCG TCGGCGCTGG TGGCGGCCCG CGCACGCAAA CGCCGACGCA GCCTGCGGGA GGTGTGGCCG GAGGTCGTCG ACCACCTCGC CTCGGGTGTG CGCGCCGGGC TGTCGCTGCC GGAGGCCGTC GGCCAGCTCG GCGAGCGCGG TCCGGTCGAG CTGCGCGAGC CGTTCGCACG GTTCGCGGCC GACTACCGCG CCACCGGCCG CTTCACCGAG TCGCTCGACC TGCTCAAGGC GCGGCTCGCC GACCCGGTCG CCGACCGGAT CATCGAGGCG CTCCGGCTCA CGCGTGAGGT CGGCGGCTCC GACCTGGGGC GGCTGCTGCG CACGCTGTCC ACGTTCCTGC GGGAAGATGC GCGAACGCGC GGCGAGCTCG AGGCCCGGCA GTCGTGGACG GTCAGCGGCG CCCGGCTCGC CGCCGCGGGC CCGTGGGTGG TGCTGGCGTT CCTCGCGACG CGCCCCGAGA CCGCCCGCGC CTACGACTCG GCCGCCGGGG TGCTCGTCCT CGCGGGCGGC GCCGCGTGCT CGGTCGTCGC CTACCGGCTG ATGGTCAAGA TCGGGCGCCT GCCCGAGGAA GGCCGGGTGC TGCGATGA
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Protein sequence | MGVLVGLLLG LGLFCVWWSA WAPSGRPRRT SARIARTQDL LVQAGAASVT PGALYGASAA LAAVVLLMVL ATTRSPAIGL CFAAIAAAAP SALVAARARK RRRSLREVWP EVVDHLASGV RAGLSLPEAV GQLGERGPVE LREPFARFAA DYRATGRFTE SLDLLKARLA DPVADRIIEA LRLTREVGGS DLGRLLRTLS TFLREDARTR GELEARQSWT VSGARLAAAG PWVVLAFLAT RPETARAYDS AAGVLVLAGG AACSVVAYRL MVKIGRLPEE GRVLR
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