| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0954 |
|---|
| Symbol | |
|---|
| ID | 8648464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1027613 |
|---|
| End bp | 1028638 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003325543 |
|---|
| Protein GI | 269955754 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.671843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC ACGAGAAGGA GCTCGCGGCC AAGGGCGCCG ACACGCGCCG GGAGCTCGCC
GAGACCGCGG CCGCCGGTAC CGGCTTCTCC TCGCCGGCCC AGCTGATCGA CTCCCAGGTC
GACGCCGGTG GCGTGGTGAC GCCCAGCCTG CCCAAGCAGC GCACCCTGTG GTCCGACGCG
TGGCACATGC TGCGCAGGAG CTGGATGTTC TGGGTGGGTG CGGTCCTGGC CGTGGTGTTC
ACGGTCATGG CCGTCGCGCC ACAGCTCTTC ACGAACGCCG ACCCGCGGGA GTGCAACCTG
TCGAACTCGA ACCTGAGGCC CTCGGCGGAG CACTGGTTCG GCTTTGACCA GCAGGGGTGC
GACTTCTACG CGAACGTCGT CTACGGGGCG CGCTCGTCCC TGACCATCGG CCTGCTGAGC
GTGCTGGTGA TCCTGGCGCT CGGCATCCTC CTGGGGGCGG TCGCCGGGTA CTACGGCGGT
CTGCTCGACA CCCTGGTCTC GCGGGTCGCG GACATCTTCT ACGCGCTGCC GCTCATCCTC
GGCGCCGTCG TGCTGCTGCG CGTGGGCCCG CAGACGGGGT TCCCGCTGCT CGCGGAACGC
GGCGTGTGGG CGATCATCAT CGCCCTGGGC ACGTTCGGCT GGATGACGTC GATGCGCCTG
GTGCGATCCC AGGTCATCGC GCTGAAGAAC AGCGACTTCG TCGCCGCAGC GCGTGCCCTG
GGGGCTTCCA GCACCCGGGT GCTCGTCCGG CACATCCTGC CGAACGCCGT GGCGCCCGTG
CTCGTCTACG CCACGATCAC GATCGGTGTG CTGATCGCCG CCGAGGCCAC GCTGACCTTC
CTCGGCGTCG GGCTCACGCG GCCGGCGATC TCCTGGGGCC TGCAGATCAG CACGGGGCAG
AGCCTGCTGC GGACGGCACC GCACATCGTG CTGTTCCCCA GCTTCTTCCT GTCCCTGACC
GTCATCGCGT TCACGATGCT GGGCGATGCC CTGCGTGACG CCCTGGACCC GAAGGCGCGA
CGATGA
|
|---|
| Protein sequence | MSEHEKELAA KGADTRRELA ETAAAGTGFS SPAQLIDSQV DAGGVVTPSL PKQRTLWSDA
WHMLRRSWMF WVGAVLAVVF TVMAVAPQLF TNADPRECNL SNSNLRPSAE HWFGFDQQGC
DFYANVVYGA RSSLTIGLLS VLVILALGIL LGAVAGYYGG LLDTLVSRVA DIFYALPLIL
GAVVLLRVGP QTGFPLLAER GVWAIIIALG TFGWMTSMRL VRSQVIALKN SDFVAAARAL
GASSTRVLVR HILPNAVAPV LVYATITIGV LIAAEATLTF LGVGLTRPAI SWGLQISTGQ
SLLRTAPHIV LFPSFFLSLT VIAFTMLGDA LRDALDPKAR R
|
|---|
| |