| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0952 |
|---|
| Symbol | |
|---|
| ID | 8648462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1024882 |
|---|
| End bp | 1026546 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | 4-phytase |
|---|
| Protein accession | YP_003325541 |
|---|
| Protein GI | 269955752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGATCA GGCGAATCGC CAGTGTGACT GCGACGGCGG CAGCCTTCGC GCTCGTGATG
ACCGCGTGCA GCGGCGGCGA CGACGGTGCC GAGTCCACGG AGAGCCCGAC CCAGGCCGCA
GCCTCGGGCG GATCGTTCTC CATGTACATC GGCGAGCCGG AGAACGCGCT CGTCCCGGGC
AACACGTCCG AGACCGAGGG CGGGCAGATC GTCGACGCCC TGTGGACCGG CCTGGTGACC
TATGGCGACG AGACGGAGCT CACCTGGGAC GGTGTGGCCG AGTCGATCGA GTCCGACGAC
GCCACCACCT GGACCGTGAC GCTCAAGGAC GGCTGGACCT TCCACGACGG CACCCCCGTC
GACGCCAAGT CGTTCGTCGA CGCGTGGAAC TACACCTCCT ACTCGCCGAA CGGGTACGGC
AACTCGTACT TCTTCTCGAA CATCGTCGGC TACGACGAGC TGCAGGCCGA GACGGACGAC
GAGGGCGAGG TCGTCGAGGA CCCCGCGGCG ACCGAGATGT CCGGCCTCGA GGTCGTGGAC
GAGAAGACGT TCACGGTCGA GCTGACGGGT CCGTTCGCCC AGTTCCCGAT CACCACCGGC
TACACGGCCT TCTTCCCGCT CCCGGAGGCG TTCTTCGACG ACCCGGATGC GTTCGGCAAG
AAGCCGATCG GCAACGGCCC GTTCATGGCC GAGACCGAGC TCGTCCCCGG CCAGGGCATC
ACCCTCGCCA GGTACGAGGA CTACGCCGGC CCGAACAAGG CCAACGCCGA CTCTGTCGAG
CTGCGCATCT ACTCCTCCAT GGACACGGCG TACCTGGACG TCCAGGGCGG CTCGCTCGAC
ATCGTCGACA CGATCCCGCC GGACGCCATC ACCACGGCAC CCGACGTGTT CGGCGACCGC
TACCAGGAGT TCCCGTCGTC GTCGTTCACG TACGTGGGCA TCCCGACGTA CGACGAGCGC
TACCAGGACA AGCGTGTCCG TCAGGCGATC TCCATGGCGA TCGACCGTGA GGCCATCACC
GAGGCCATCT TCAACGGCAC GCGCCTCCCG GCGGCCGACG CGATCCCCCC GGTCATCGAC
GGCTACCGTG AGGACGCCTG CAAGTACTGC ACGCTCAACG TCGAGGAGGC CAACACGCTG
CTCGACGAGG CCGGCTTCGA CCGGTCGCAG CCGATCGAGC TGTGGTTCAA CGCCGGCGCC
GGGCACGACG CCTGGGTCGA GGCCGTGGGC AACCAGGTCA AGCAGAACCT CGGTGTGGAC
TTCGTGCTCA AGGGCGACCT GGACTTCGCC CAGTACCTCC CGCTCGGTGA CGCGAAGGGC
TTCACCGGTC CGTTCCGTCT GGGCTGGGTG ATGGACTACC CGTCGCCGCA GAACTACCTG
GAGCCGCTGT ACTCGACCGC GGCCCTCCCG CCGGCCGGAT CGAACGCGTC GTTCTACTCC
AACCCGGAGT TCGACGCCCT GATCTCCCAG GGCAACCAGG CGGCCACCAA CGAGGAGGCC
ATCGCGCTCT ACCAGCAGGC GGACGACGTC CTCCTCGAGG ACCTGCCGAT CATCCCGATG
TTCTTCGGGC TGGTCCAGTC CGTGAACTCG GAGAACGTCA CCAACGTCCG GGTGGACGCG
TTCACGCGCG TCGACCTGCC CGCCGTGCAG GTCGTCAACC CGTGA
|
|---|
| Protein sequence | MKIRRIASVT ATAAAFALVM TACSGGDDGA ESTESPTQAA ASGGSFSMYI GEPENALVPG
NTSETEGGQI VDALWTGLVT YGDETELTWD GVAESIESDD ATTWTVTLKD GWTFHDGTPV
DAKSFVDAWN YTSYSPNGYG NSYFFSNIVG YDELQAETDD EGEVVEDPAA TEMSGLEVVD
EKTFTVELTG PFAQFPITTG YTAFFPLPEA FFDDPDAFGK KPIGNGPFMA ETELVPGQGI
TLARYEDYAG PNKANADSVE LRIYSSMDTA YLDVQGGSLD IVDTIPPDAI TTAPDVFGDR
YQEFPSSSFT YVGIPTYDER YQDKRVRQAI SMAIDREAIT EAIFNGTRLP AADAIPPVID
GYREDACKYC TLNVEEANTL LDEAGFDRSQ PIELWFNAGA GHDAWVEAVG NQVKQNLGVD
FVLKGDLDFA QYLPLGDAKG FTGPFRLGWV MDYPSPQNYL EPLYSTAALP PAGSNASFYS
NPEFDALISQ GNQAATNEEA IALYQQADDV LLEDLPIIPM FFGLVQSVNS ENVTNVRVDA
FTRVDLPAVQ VVNP
|
|---|
| |