Gene Xcel_0887 details

Gene Information

• Locus tag: Xcel_0887
• ID: 8648397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 952959
• End bp: 955013
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 74%
• Product: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
• Protein accession: YP_003325477
• Protein GI: 269955688

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCACC CCGCCGTCGC CGACCTCGTC GCCCGGTCCA ACCGGCTCGG CGCCGACCCG 
CGCACCACCA ACTACGCCGG CGGCAACACC TCCGCCAAGG GCACCGAGAC CGACCCCGTC 
ACGGGGGAGC CGGTCGAGCT GCTGTGGGTC AAGGGGTCGG GCGGGGACCT GGGCACGCTG 
ACCGAGAAAG GCCTGGCCGT GCTGCGCCTG GACCGGCTGC GCTCGCTGAC CGGCGTCTAC 
CCGGGCGTCG AGCGCGAGGA CGAGATGGTC GCCGCGTTCG ACCACTGCCT GTTCGGCAAG 
GGCGGCGCGG CACCGTCGAT CGACACCGCG ATGCACGGCC TCGTCGACGC CGCGCACGTC 
GACCACCTGC ACCCCGACGC CGGCATCGCC ATCGCCACGG CCGCCGACGG CGAGGCGCTG 
ACCCGCACCA TCTTCGGCGA CAAGGTGGTC TGGGTGCCGT GGCGGCGCCC CGGCTTCCAG 
CTCGGGCTCG ACATCGCCGC CGTCAAGGAG GCCAACCCGC AGGCCGTCGG CACCGTGCTG 
GGCGGGCACG GCATCACCGC CTGGGGCGAC ACCTCCGACG ACGCCGAGGC CGCGTCGCAG 
TGGATCATCA CCACCGCGCA GGCCTACCTC GACGCCCACG GCAGGCCCGA GCCGTTCGGC 
CCCGTGCTGC CCGGGCACGA GCCGCTGCCC GAGGCCGAAC GCCGCGCCAA GGCCGCGGCG 
CTGGCCCCGC ACCTGCGCGC GATCGCCTCC GCCGACCGCC CGCAGGTGGG CCACTACACC 
GACTCCGACG GCGTGCTCGA CTTCGTCTCC CGCGCCCGGC ACGCCGAGCT CGCCGCGCTC 
GGGACGAGCT GCCCCGACCA CTTCCTGCGC ACCAAGGTGC GGCCGCTCGT AGTCGACCTG 
CCCGCGACGG CCAGCATCGA GGAGATCGTC GGCCGGCTGC CCGCGCTGCA CGAGGCGTAC 
CGCGCCGACT ACACCGCCTA CTACGAGCGG GGCGCCGCCC AGGCCCGCGC CCGCGGCGAG 
GAACCGCCCG CCCTGCGCGG CGCCGACCCC GCGATCGTGC TGGTCCCCGG CGTCGGCATG 
TTCTCCTACG GCGCCGACAA GCAGACCGCG CGCGTCGCCG GAGAGTTCTA CGTCAACGCC 
ATCAACGTCA TGCGCGGCGC CGAGGCGCTG TCCACGTACG CCCCCATCGA CGAGGACGAG 
AAGTTCCGCA TCGAGTACTG GGCGCTCGAA GAGGCCAAGC TGCAGCGCCG CCCCCAGCCC 
AAGCCGCTGG CCACCCGCAT CGCGTTCGTC ACCGGCGGGG CGTCCGGCAT CGGCAAGGCC 
ATCGCCACCC GGCTCGCCGC CGAGGGCGCC TGCGTCGCCG TCGCCGACCT CGACGAGGCC 
AAGGCCCAGG CCGCCGCCGC CGAGATCGGC GGGCCCGACG TCGCCGTCGG CATCGCCGCG 
AACGTCGCCG ACGAGGCCGC CGTCCAGGCC GCCCTCGCCG CGACCGTGCT CGCCTTCGGC 
GGCGTCGACA TCGTCGTCAA CAACGCCGGA CTGTCGCTGA GCCGATCCCT GTTCGACACC 
ACCGAGGCCG ACTGGGACCT CCAGCACGAC GTCATGGCCA AGGGATCCTT CCTCGTCGCC 
AAGCACTTCG CCCAGGCCCT CGTCGACCAA GGGCTCGGCG GCGACGTCAT CTACATCTCG 
TCCAAGAACT CCGTGTTCGC CGGCCCCAAC AACATCGCCT ACTCCGCCGC CAAGGCCGAC 
CAGGCCCACC AGGTCCGCCT GCTCGCCGCC GAGCTCGGCC CGCACGGCAT CAAGGTCAAC 
GGCATCAACC CCGACGGCGT CGTGCGCGGC TCCGGCATCT TCGCCGGCGG CTGGGGCGCC 
AACCGGGCCG CCGTGTACGG CGTGCCCGAG GAGAAGCTGG GCGAGTTCTA CGCCCAGCGC 
ACCCTGCTGG GACGCGAGGT GCTGCCCGAG CACGTCGCCA ACGCGGCCTA TGCGCTGTGC 
ACCGGCGACT TCTCCCACAC GACCGGCCTG CACGTGCCCG TCGACGCGGG CGTCGCCGCC 
GCGTTCCTGC GCTGA 

 

Protein sequence

MTHPAVADLV ARSNRLGADP RTTNYAGGNT SAKGTETDPV TGEPVELLWV KGSGGDLGTL 
TEKGLAVLRL DRLRSLTGVY PGVEREDEMV AAFDHCLFGK GGAAPSIDTA MHGLVDAAHV 
DHLHPDAGIA IATAADGEAL TRTIFGDKVV WVPWRRPGFQ LGLDIAAVKE ANPQAVGTVL 
GGHGITAWGD TSDDAEAASQ WIITTAQAYL DAHGRPEPFG PVLPGHEPLP EAERRAKAAA 
LAPHLRAIAS ADRPQVGHYT DSDGVLDFVS RARHAELAAL GTSCPDHFLR TKVRPLVVDL 
PATASIEEIV GRLPALHEAY RADYTAYYER GAAQARARGE EPPALRGADP AIVLVPGVGM 
FSYGADKQTA RVAGEFYVNA INVMRGAEAL STYAPIDEDE KFRIEYWALE EAKLQRRPQP 
KPLATRIAFV TGGASGIGKA IATRLAAEGA CVAVADLDEA KAQAAAAEIG GPDVAVGIAA 
NVADEAAVQA ALAATVLAFG GVDIVVNNAG LSLSRSLFDT TEADWDLQHD VMAKGSFLVA 
KHFAQALVDQ GLGGDVIYIS SKNSVFAGPN NIAYSAAKAD QAHQVRLLAA ELGPHGIKVN 
GINPDGVVRG SGIFAGGWGA NRAAVYGVPE EKLGEFYAQR TLLGREVLPE HVANAAYALC 
TGDFSHTTGL HVPVDAGVAA AFLR